Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is mlaE [H]
Identifier: 117919131
GI number: 117919131
Start: 798274
End: 799059
Strand: Direct
Name: mlaE [H]
Synonym: Shewana3_0679
Alternate gene names: 117919131
Gene position: 798274-799059 (Clockwise)
Preceding gene: 117919130
Following gene: 117919132
Centisome position: 16.05
GC content: 53.82
Gene sequence:
>786_bases GTGAAGTTATTCGACAGTATTGCCGACCTCGGCCGCAGCGCTATCGATTTAGTGCTCGGTTTTGGCCGTGCGGGCCTGAT GCTCTGGGGCGCGATTTTTCGCTGGCCTCGGGTGCGTAAAGGTTTTCCATTATTAGTGCGCCAAATCTATGTGGTCGGCG TACAATCTATGGTCATTATTGTGGTCTCGGGCCTGTTTATCGGCATGGTGTTGGCGCTGCAGGGCTACAACATCTTAGTT GGTTTCGGTACTGAGGAGAGCTTAGGCCCCATGGTGGCCTTAAGCTTACTACGTGAACTCGGTCCTGTGGTCACAGCATT ATTATTCGCTGGCCGCGCTGGTTCGGCGCTGACCGCCGAAATCGGTCTGATGAAGAGTACAGAGCAGTTATCCAGCTTAG AGATGATGGCGATTGACCCACTTAGGCAAATCATTGCGCCACGCTTTTGGGCGGGGGTGATCAGCATGCCGTTATTGGCG CTGATGTTTACTGCGGTAGGCATTTATGGCGGCCATTTAGTGGGTGTGGAATGGAAAGGCATCGATGGCGGGGCCTTCTG GTCGATTCTGCAAGCCTCGGTCGAATGGCGCCAAGACATAGTGAACTGCCTGATTAAGAGCGGCGTGTTTGCCGTGGTGG TGACTTGGATTGCCTTATACCGTGGTTATCAAGTGGTGCCGAATCCGGAAGGGATCAGCCGTGCAACCACCTCAACCGTG GTGCAATCGAGCCTCGCCGTACTGGCATTGGACTTTTTACTAACAGCCCTGATGTTTGGCCGCTAA
Upstream 100 bases:
>100_bases AGCTCAAACAGTTTATTCAAGGCGCGCCCGACGGCCCTGTGCCTTTCCACTATCCGGCGAAGGATTATCAGCAAGAATTA ATGGCTAAAGGAGCTGGCAA
Downstream 100 bases:
>100_bases CGGATTGCAGCGCCAAGGATACAGATAGACGGATTAACAGAGTGGTAACTGAGCATGTTGACACGAAAAATTGAATTATT AGTGGGTATGTTTCTCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKLFDSIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLA LMFTAVGIYGGHLVGVEWKGIDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTV VQSSLAVLALDFLLTALMFGR
Sequences:
>Translated_261_residues MKLFDSIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLA LMFTAVGIYGGHLVGVEWKGIDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTV VQSSLAVLALDFLLTALMFGR >Mature_261_residues MKLFDSIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVIIVVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAEIGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLA LMFTAVGIYGGHLVGVEWKGIDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTV VQSSLAVLALDFLLTALMFGR
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=259, Percent_Identity=68.7258687258687, Blast_Score=353, Evalue=7e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 28163; Mature: 28163
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLFDSIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVII CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC IDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTV CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH VQSSLAVLALDFLLTALMFGR HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLFDSIADLGRSAIDLVLGFGRAGLMLWGAIFRWPRVRKGFPLLVRQIYVVGVQSMVII CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH VVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH IGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISMPLLALMFTAVGIYGGHLVGVEWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC IDGGAFWSILQASVEWRQDIVNCLIKSGVFAVVVTWIALYRGYQVVPNPEGISRATTSTV CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHH VQSSLAVLALDFLLTALMFGR HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]