Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is gltP [H]
Identifier: 117919094
GI number: 117919094
Start: 758809
End: 760059
Strand: Direct
Name: gltP [H]
Synonym: Shewana3_0642
Alternate gene names: 117919094
Gene position: 758809-760059 (Clockwise)
Preceding gene: 117919093
Following gene: 117919101
Centisome position: 15.26
GC content: 50.76
Gene sequence:
>1251_bases ATGATTAAATCACTTTCGACACGGATCTTTATCGGTCTGTTTGCGGGACTTATTCTTGGCACCTTAGTGCAATATTTTCT AAACGATATTGGCTTCTTTTCTGGCAATTTAGTCGAACTGGCTGGCGGCGTCGGTACCATGTTCGTCAATATGATCATGA TGTTGGTCGTGCCTCTGGTGTTTGTCAGTATCGTTTGCGGCGTATGTGAGCTGCAGGACTTAAAAAGCTTTGGCCGCCTT GGCGGCAAAACCTTCGGCTTTTACATCGTTAATACCCTGGTCGCTATCTCAACCGCCCTATTAGTCGTATTACTGCTCGA CCCTGGTAAAGGCGTCGATATGAGCAGCACAGATGGTGTGGCCATTACCGCGACCGAACTCCCCAGCTTAATGGCGTTGC TGATTGATATAGTGCCGCGCAACCCGGTGGCGGCTTTTATGTCGGGCAATATGCTGCAAGTGATCTTTATGGCACTGATG CTGGGTGGGGTGATTAAATCCCTCGGCGAGCATGTGGCTGGCGCGGTACAAGGTTTTCAAACCGCCAATAAAATCATGAT GAAACTGATTTCTGTGGTGATGAGCCTTGCGCCTTATGGCGTGTTTGCGCTGATGTTTAAGTTAGGCGCCACCTTAGATG CGGCGGTATTTATCAGTGTGCTCGAATATGTCGTGATCATTCTGGCGCTGTTATTACTGTGGATTTTTGTGGTCTATCCG CTGGCGGTGGGGTTCTTCACACCGATTTCGGCCAAGAGCTTTCGCGAGAAAACCCAAGAGCAAGTGCTGTTTTCCCTGTC TACCGCCAGCTCTAATGCCACCATTCCTGTGACTATGCGCACCCTAACGGAAAAGCTTGGGGTGAATCGCGCCGTGGCAG GCTTTGGCGTGCCGCTTGGGGCGACCATGAATATGGGCGGCGTGGCAATTTATATCACGATTGCGATTTTCTTTGTCGCC AATGCTTTCGGCATGCCAATCACCAGCGAACAATTGCCATCGCTGCTGTTTAGTATCTTCCTGTTATCCGTTGGCGCGGG TGGTGTACCCGGTGGCGGCATGGTGATGATTGGGGTATTAATCCATCAAATGGGTTTGCCGATTGAAGCCTTTGCGATTG TGGCCGCACTGGACCGTATCATCGACATGGTGCTGACCTCCTGCAACGTAGTGGGGGATACGGCGGTGTTGACCATAGTC GACCAAACCGAAAAGACCCATCAAGTCGAGCTGGTCGATAGCGAGTCTTAA
Upstream 100 bases:
>100_bases CATGTTTCACTATCCCCGCCTGAACCGAAAAGGGAATGGCGATTTTGCTCATCAAGGAAGATGAAGAATAATAGATGAGC TATTTGGGGAAACCATAAGC
Downstream 100 bases:
>100_bases ATCGCACAACTAAAAAAGCCACTGATTACAGTGGCTTTTTTGTATCAGGACGAGACACGCCCTTACTGGCTACACTTCTG TTTTAGCTGGCTGACCGCTT
Product: sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MIKSLSTRIFIGLFAGLILGTLVQYFLNDIGFFSGNLVELAGGVGTMFVNMIMMLVVPLVFVSIVCGVCELQDLKSFGRL GGKTFGFYIVNTLVAISTALLVVLLLDPGKGVDMSSTDGVAITATELPSLMALLIDIVPRNPVAAFMSGNMLQVIFMALM LGGVIKSLGEHVAGAVQGFQTANKIMMKLISVVMSLAPYGVFALMFKLGATLDAAVFISVLEYVVIILALLLLWIFVVYP LAVGFFTPISAKSFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLGATMNMGGVAIYITIAIFFVA NAFGMPITSEQLPSLLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIV DQTEKTHQVELVDSES
Sequences:
>Translated_416_residues MIKSLSTRIFIGLFAGLILGTLVQYFLNDIGFFSGNLVELAGGVGTMFVNMIMMLVVPLVFVSIVCGVCELQDLKSFGRL GGKTFGFYIVNTLVAISTALLVVLLLDPGKGVDMSSTDGVAITATELPSLMALLIDIVPRNPVAAFMSGNMLQVIFMALM LGGVIKSLGEHVAGAVQGFQTANKIMMKLISVVMSLAPYGVFALMFKLGATLDAAVFISVLEYVVIILALLLLWIFVVYP LAVGFFTPISAKSFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLGATMNMGGVAIYITIAIFFVA NAFGMPITSEQLPSLLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIV DQTEKTHQVELVDSES >Mature_416_residues MIKSLSTRIFIGLFAGLILGTLVQYFLNDIGFFSGNLVELAGGVGTMFVNMIMMLVVPLVFVSIVCGVCELQDLKSFGRL GGKTFGFYIVNTLVAISTALLVVLLLDPGKGVDMSSTDGVAITATELPSLMALLIDIVPRNPVAAFMSGNMLQVIFMALM LGGVIKSLGEHVAGAVQGFQTANKIMMKLISVVMSLAPYGVFALMFKLGATLDAAVFISVLEYVVIILALLLLWIFVVYP LAVGFFTPISAKSFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLGATMNMGGVAIYITIAIFFVA NAFGMPITSEQLPSLLFSIFLLSVGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIV DQTEKTHQVELVDSES
Specific function: This carrier protein is part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI40254478, Length=471, Percent_Identity=26.963906581741, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI169790839, Length=426, Percent_Identity=25.8215962441315, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI21314632, Length=426, Percent_Identity=26.7605633802817, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI194239697, Length=444, Percent_Identity=24.7747747747748, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI4827012, Length=239, Percent_Identity=30.1255230125523, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI5032093, Length=399, Percent_Identity=26.8170426065163, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI66773030, Length=270, Percent_Identity=30, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI223468566, Length=283, Percent_Identity=27.5618374558304, Blast_Score=105, Evalue=9e-23, Organism=Homo sapiens, GI223468564, Length=274, Percent_Identity=27.3722627737226, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI262359914, Length=364, Percent_Identity=25.8241758241758, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI301601644, Length=122, Percent_Identity=36.0655737704918, Blast_Score=88, Evalue=1e-17, Organism=Escherichia coli, GI1790514, Length=419, Percent_Identity=30.0715990453461, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1789947, Length=422, Percent_Identity=26.0663507109005, Blast_Score=146, Evalue=2e-36, Organism=Escherichia coli, GI1788024, Length=395, Percent_Identity=29.873417721519, Blast_Score=111, Evalue=9e-26, Organism=Escherichia coli, GI1789473, Length=403, Percent_Identity=28.287841191067, Blast_Score=96, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71983106, Length=463, Percent_Identity=27.645788336933, Blast_Score=156, Evalue=1e-38, Organism=Caenorhabditis elegans, GI71983099, Length=427, Percent_Identity=28.5714285714286, Blast_Score=156, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17537407, Length=417, Percent_Identity=26.378896882494, Blast_Score=134, Evalue=6e-32, Organism=Caenorhabditis elegans, GI193206505, Length=430, Percent_Identity=25.1162790697674, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI193206654, Length=449, Percent_Identity=26.5033407572383, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71996953, Length=427, Percent_Identity=26.463700234192, Blast_Score=120, Evalue=9e-28, Organism=Caenorhabditis elegans, GI17541374, Length=403, Percent_Identity=25.0620347394541, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583025, Length=445, Percent_Identity=24.9438202247191, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI17137668, Length=445, Percent_Identity=24.9438202247191, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI24583023, Length=445, Percent_Identity=24.9438202247191, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI281360481, Length=453, Percent_Identity=22.7373068432671, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI281360483, Length=453, Percent_Identity=22.7373068432671, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI17137666, Length=453, Percent_Identity=22.7373068432671, Blast_Score=86, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43991; Mature: 43991
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKSLSTRIFIGLFAGLILGTLVQYFLNDIGFFSGNLVELAGGVGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH FVSIVCGVCELQDLKSFGRLGGKTFGFYIVNTLVAISTALLVVLLLDPGKGVDMSSTDGV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AITATELPSLMALLIDIVPRNPVAAFMSGNMLQVIFMALMLGGVIKSLGEHVAGAVQGFQ EEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TANKIMMKLISVVMSLAPYGVFALMFKLGATLDAAVFISVLEYVVIILALLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVGFFTPISAKSFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLG HHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHCCCHHHHHCCCCCC ATMNMGGVAIYITIAIFFVANAFGMPITSEQLPSLLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIVDQTEKTHQVELVDSES HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCC >Mature Secondary Structure MIKSLSTRIFIGLFAGLILGTLVQYFLNDIGFFSGNLVELAGGVGTMFVNMIMMLVVPLV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH FVSIVCGVCELQDLKSFGRLGGKTFGFYIVNTLVAISTALLVVLLLDPGKGVDMSSTDGV HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AITATELPSLMALLIDIVPRNPVAAFMSGNMLQVIFMALMLGGVIKSLGEHVAGAVQGFQ EEEHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TANKIMMKLISVVMSLAPYGVFALMFKLGATLDAAVFISVLEYVVIILALLLLWIFVVYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAVGFFTPISAKSFREKTQEQVLFSLSTASSNATIPVTMRTLTEKLGVNRAVAGFGVPLG HHHHHCCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEHHHHHHHHHCCCHHHHHCCCCCC ATMNMGGVAIYITIAIFFVANAFGMPITSEQLPSLLFSIFLLSVGAGGVPGGGMVMIGVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIVDQTEKTHQVELVDSES HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1971622; 1551855; 8265357; 9278503 [H]