Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117919093

Identifier: 117919093

GI number: 117919093

Start: 757546

End: 758418

Strand: Direct

Name: 117919093

Synonym: Shewana3_0641

Alternate gene names: NA

Gene position: 757546-758418 (Clockwise)

Preceding gene: 117919092

Following gene: 117919094

Centisome position: 15.24

GC content: 50.06

Gene sequence:

>873_bases
ATGGCTCGCCTAGGCAAGCAGCAGTTGCAACTCTTGGAGGGCGTTTATCTTAATCGCTCTCCAAGGGTAAAACTCAGCCC
GAATTGGCGAACGATTTACCGCGAGTTAGAAGTGGGCGAGCTGGATGGCGCGGAAAAATATTTGTGTTTTGCGCCGCGAG
ATTTTGAGTTGCTGCGCAAAGGTGTATTGGCAAAAGAGGGCGTGGATTTACAGGCGCTGGACTTTAATCTAAACCGTATC
GCCATGTCCGCCCAAAGCCAGAATGAAAAGCTGGCGAGCATCCGCCCCGAAGCCGAGTATGTTTTGTTGAAGTATCTCGG
GTTTGACTCGCCTCCCATGGGGATGTCTACGCGCTCTTCGTTACGTATTCCCATAGATGAAGCGCAACAGCTTTGCCATG
AGCTTAATGTTAACGCCATCTTAGTGATTGAAAACCTAGATATATTTGATGCCATCACTCAAGCGCGCTTACCCGCCGAA
CTTAGCCGCGTTATGGTGATTTACCGTGGTAGCGGCCACCATTCCCCCATTGGTGTGCGACAGTTTTTACAGGCGATGGC
GGGTAAAGTGCCGATCATTGCCTTTACCGATCTCGACCCCGCTGGGCTGCAAATTGCCCATACCTTAACGGGCATGACCC
ATTGTATCGTGCCGCAGTTAGCGCTTTTTGCGCCCAACGAGTTACTCGCTATCCCACAGATTAATTCCGCTGATGATTTT
GCCAAGCAAGCGCCTCAGGCTAAATATTTACAGTCAGCCGATTTAAAAAATTGGCGGCAATTAAGCCTTTGGTTAACTCA
GCAACGCATTAGCATTAAACAGCAGCACCTGCTGGCGCATCGGCTTGAGCTAGTGCTACTGGCATATTGTTAG

Upstream 100 bases:

>100_bases
AAGGTTTACCCGATGAGCATAAGGCTTACTTTGAGTTAGAACCCTTAGGCGAACCTCACCCCATCTACAGCGGTAACTTT
ATTATCCGCGATGTGGAATT

Downstream 100 bases:

>100_bases
TCGTTTCCCTTCCCCATCTCTCTGTAAATATCACTATTTGTAGTTTTAAATTCTAATTAAAATGTTTATTTGGTTTTTAA
ATCTAGCGTTATTCATGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRKGVLAKEGVDLQALDFNLNRI
AMSAQSQNEKLASIRPEAEYVLLKYLGFDSPPMGMSTRSSLRIPIDEAQQLCHELNVNAILVIENLDIFDAITQARLPAE
LSRVMVIYRGSGHHSPIGVRQFLQAMAGKVPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALFAPNELLAIPQINSADDF
AKQAPQAKYLQSADLKNWRQLSLWLTQQRISIKQQHLLAHRLELVLLAYC

Sequences:

>Translated_290_residues
MARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRKGVLAKEGVDLQALDFNLNRI
AMSAQSQNEKLASIRPEAEYVLLKYLGFDSPPMGMSTRSSLRIPIDEAQQLCHELNVNAILVIENLDIFDAITQARLPAE
LSRVMVIYRGSGHHSPIGVRQFLQAMAGKVPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALFAPNELLAIPQINSADDF
AKQAPQAKYLQSADLKNWRQLSLWLTQQRISIKQQHLLAHRLELVLLAYC
>Mature_289_residues
ARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRKGVLAKEGVDLQALDFNLNRIA
MSAQSQNEKLASIRPEAEYVLLKYLGFDSPPMGMSTRSSLRIPIDEAQQLCHELNVNAILVIENLDIFDAITQARLPAEL
SRVMVIYRGSGHHSPIGVRQFLQAMAGKVPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALFAPNELLAIPQINSADDFA
KQAPQAKYLQSADLKNWRQLSLWLTQQRISIKQQHLLAHRLELVLLAYC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32632; Mature: 32501

Theoretical pI: Translated: 7.99; Mature: 7.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRK
CCCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH
GVLAKEGVDLQALDFNLNRIAMSAQSQNEKLASIRPEAEYVLLKYLGFDSPPMGMSTRSS
CCHHHCCCCEEEEECCHHHEEECCCCCCCHHHHCCCCHHEEEEEECCCCCCCCCCCCCCC
LRIPIDEAQQLCHELNVNAILVIENLDIFDAITQARLPAELSRVMVIYRGSGHHSPIGVR
EECCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHEEEEEEEECCCCCCCHHHH
QFLQAMAGKVPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALFAPNELLAIPQINSADDF
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHH
AKQAPQAKYLQSADLKNWRQLSLWLTQQRISIKQQHLLAHRLELVLLAYC
HHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARLGKQQLQLLEGVYLNRSPRVKLSPNWRTIYRELEVGELDGAEKYLCFAPRDFELLRK
CCCCHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHH
GVLAKEGVDLQALDFNLNRIAMSAQSQNEKLASIRPEAEYVLLKYLGFDSPPMGMSTRSS
CCHHHCCCCEEEEECCHHHEEECCCCCCCHHHHCCCCHHEEEEEECCCCCCCCCCCCCCC
LRIPIDEAQQLCHELNVNAILVIENLDIFDAITQARLPAELSRVMVIYRGSGHHSPIGVR
EECCHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCHHHEEEEEEEECCCCCCCHHHH
QFLQAMAGKVPIIAFTDLDPAGLQIAHTLTGMTHCIVPQLALFAPNELLAIPQINSADDF
HHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHH
AKQAPQAKYLQSADLKNWRQLSLWLTQQRISIKQQHLLAHRLELVLLAYC
HHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA