Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is fhs [H]
Identifier: 117919013
GI number: 117919013
Start: 653188
End: 654900
Strand: Direct
Name: fhs [H]
Synonym: Shewana3_0560
Alternate gene names: 117919013
Gene position: 653188-654900 (Clockwise)
Preceding gene: 117919011
Following gene: 117919015
Centisome position: 13.14
GC content: 53.53
Gene sequence:
>1713_bases ATGCTAACCGATATGGATATTTCGCGCCGTGCGCACCTAAAAGATATCGCAGCGCTTGGCGCCGAGTTTGGGTTATTGCC CGATGAGATGCAGCTCTTTGGCAAGACTAAAGCCAAGGTCGATTTACGTGCGCAGCAGCGCTTAGCCGAGCAGCAACAGG GCAAACTGATCATTGTCACCGCCGTGACACCTACGCCCCACGGCGAAGGCAAAACCGTCACCACCATTGGCTTAACCCAA TCCCTCAAAGCGCTCGGTAACAAGGTGTGCGCCTGTATTCGACAGCCCAGTATGGGCCCGGTTTTTGGGGTGAAAGGTGG CGCTGCTGGTGGCGGTTACGCCCAAGTGGTGCCCATGCAGGAGCTGAATCTGCATCTAACGGGTGATATTCATGCCGTCA GCAGTGCCCATAATCTTGGCGCGGCGGCGATAGCCTCTCGGCTGTACCATGAAACACGTTTAGGCAAGGCCGAATTTGAG TCGCAGTCTGGGCAGAATTACCTGGATATAGCGCCTAATGGCATCCGTTGGCATAGGGTGGTCGACCATAACGATCGCTG TTTACGTGAAATAGAGGTTGGGCTGGGTGAAAATAATGGCCCAGCTTACACCTCTGGCTTTGATATTACCGCTGCCTCTG AGTTAATGGCGATTCTTGCACTCAGTCGTAATCTGGCGGATATGCGCGCGCGTATTGGCAAGCTTGTGCTGGCAGTCAAT CGTCAAGGTGCGGCTATTAGCGCGGAAGACCTTGGGGTTGCCGGCGCGATGACGGCGATCATGGCGGATGCGGTAAAACC TACCTTGATGCAGACTTTAAACGGTGCGCCTTGTCTTATCCACGCAGGGCCATTTGCCAATATTGCCCATGGTAACTCGT CGGTGATTGCCGACGATATCGCCTTAAAATTGGCCGATTTTGTGGTAACGGAAGGTGGTTTTGGCTCCGATATGGGGTTT GAGAAATTTTGTAATATCAAGGCGCGCCAGTCTGGATTAGCCCCGAGCGCTGCGGTGTTAGTGACCACCTTAAAGGCATT GAAGGCAAATAGCGGCTTGACGTCGGATGCGGATATCAATGCGCCCGACCAAGCCCGTCTCGAGGCGGGATTTGCCAACT TAAACTGGCATATCAACAATGTGGCGCGTTACGGTATTCCCGTTGTGGTGGCTATTAATCGCTTTGCAACCGATACGGAT GCCGAGCTTAACTGGTTGATTGAAGCCGTTGCGGGCACTGCCGCCTTTGGCTGCGAGCTTAGCGAGGCTTTCAGCCAAGG TGAGGCGGGGGCGCTGACCTTGGCGCAAACCGTCATGCGCGCCTGTGAGCAGCCAAGCGAGTTTACCCTGCTATATCCCG ATGAAATGGCGCTTGAGGCGAAATTATCGACCTTGGCCGAAGTTGGCTATGGCGCTACTGGGGTGAGTTTATCCGAGGCG GCTAAGTTGCAATTACAAGAACTCAGTGCCCTTGGCTACGCCGATTTACCCGTCTGCATGGCAAAAACACCCTTATCCAT TAGCCATGACCCTCAACTTAAAGGCGTACCGCAAGGTTTTATCGTGCCAGTGCGCGAGTTAGTGTTAAATGCTGGAGCCG GATTTATTACCGCGCTGGTGGGGAATGTGATGACTATGCCGGGACTTGGATTAGTTCCGGGCTATTTAAAGGTTGATATC GGCGCCGATGGTGAGATTACCGGTTTAGGTTAA
Upstream 100 bases:
>100_bases ATCAGCCGTTGCTGATACTTACCGATTTTGCATACCTATTTTGTATTTCTTGCTCGCATGCCGAGCGGGGATACCAAAAT ACCCAAGGGAGAGATGACCC
Downstream 100 bases:
>100_bases TCGATTAGCAGTTCGAATATCATGAAAAAGGCGCAATCTAGGATTGCGCCTTTTGTTTACTTCTCGCCTTGGCGAAGCGT TATTTACTGGTTTGGTAAAT
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MLTDMDISRRAHLKDIAALGAEFGLLPDEMQLFGKTKAKVDLRAQQRLAEQQQGKLIIVTAVTPTPHGEGKTVTTIGLTQ SLKALGNKVCACIRQPSMGPVFGVKGGAAGGGYAQVVPMQELNLHLTGDIHAVSSAHNLGAAAIASRLYHETRLGKAEFE SQSGQNYLDIAPNGIRWHRVVDHNDRCLREIEVGLGENNGPAYTSGFDITAASELMAILALSRNLADMRARIGKLVLAVN RQGAAISAEDLGVAGAMTAIMADAVKPTLMQTLNGAPCLIHAGPFANIAHGNSSVIADDIALKLADFVVTEGGFGSDMGF EKFCNIKARQSGLAPSAAVLVTTLKALKANSGLTSDADINAPDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDTD AELNWLIEAVAGTAAFGCELSEAFSQGEAGALTLAQTVMRACEQPSEFTLLYPDEMALEAKLSTLAEVGYGATGVSLSEA AKLQLQELSALGYADLPVCMAKTPLSISHDPQLKGVPQGFIVPVRELVLNAGAGFITALVGNVMTMPGLGLVPGYLKVDI GADGEITGLG
Sequences:
>Translated_570_residues MLTDMDISRRAHLKDIAALGAEFGLLPDEMQLFGKTKAKVDLRAQQRLAEQQQGKLIIVTAVTPTPHGEGKTVTTIGLTQ SLKALGNKVCACIRQPSMGPVFGVKGGAAGGGYAQVVPMQELNLHLTGDIHAVSSAHNLGAAAIASRLYHETRLGKAEFE SQSGQNYLDIAPNGIRWHRVVDHNDRCLREIEVGLGENNGPAYTSGFDITAASELMAILALSRNLADMRARIGKLVLAVN RQGAAISAEDLGVAGAMTAIMADAVKPTLMQTLNGAPCLIHAGPFANIAHGNSSVIADDIALKLADFVVTEGGFGSDMGF EKFCNIKARQSGLAPSAAVLVTTLKALKANSGLTSDADINAPDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDTD AELNWLIEAVAGTAAFGCELSEAFSQGEAGALTLAQTVMRACEQPSEFTLLYPDEMALEAKLSTLAEVGYGATGVSLSEA AKLQLQELSALGYADLPVCMAKTPLSISHDPQLKGVPQGFIVPVRELVLNAGAGFITALVGNVMTMPGLGLVPGYLKVDI GADGEITGLG >Mature_570_residues MLTDMDISRRAHLKDIAALGAEFGLLPDEMQLFGKTKAKVDLRAQQRLAEQQQGKLIIVTAVTPTPHGEGKTVTTIGLTQ SLKALGNKVCACIRQPSMGPVFGVKGGAAGGGYAQVVPMQELNLHLTGDIHAVSSAHNLGAAAIASRLYHETRLGKAEFE SQSGQNYLDIAPNGIRWHRVVDHNDRCLREIEVGLGENNGPAYTSGFDITAASELMAILALSRNLADMRARIGKLVLAVN RQGAAISAEDLGVAGAMTAIMADAVKPTLMQTLNGAPCLIHAGPFANIAHGNSSVIADDIALKLADFVVTEGGFGSDMGF EKFCNIKARQSGLAPSAAVLVTTLKALKANSGLTSDADINAPDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDTD AELNWLIEAVAGTAAFGCELSEAFSQGEAGALTLAQTVMRACEQPSEFTLLYPDEMALEAKLSTLAEVGYGATGVSLSEA AKLQLQELSALGYADLPVCMAKTPLSISHDPQLKGVPQGFIVPVRELVLNAGAGFITALVGNVMTMPGLGLVPGYLKVDI GADGEITGLG
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=617, Percent_Identity=48.2982171799027, Blast_Score=515, Evalue=1e-146, Organism=Homo sapiens, GI36796743, Length=612, Percent_Identity=45.7516339869281, Blast_Score=484, Evalue=1e-136, Organism=Homo sapiens, GI310124614, Length=81, Percent_Identity=44.4444444444444, Blast_Score=81, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568737, Length=620, Percent_Identity=47.258064516129, Blast_Score=510, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17568739, Length=620, Percent_Identity=47.258064516129, Blast_Score=510, Evalue=1e-145, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=44.888178913738, Blast_Score=474, Evalue=1e-134, Organism=Saccharomyces cerevisiae, GI6319558, Length=629, Percent_Identity=42.7662957074722, Blast_Score=461, Evalue=1e-130, Organism=Drosophila melanogaster, GI24645718, Length=618, Percent_Identity=44.1747572815534, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI17137370, Length=618, Percent_Identity=44.1747572815534, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI62472483, Length=618, Percent_Identity=44.1747572815534, Blast_Score=467, Evalue=1e-131, Organism=Drosophila melanogaster, GI45551871, Length=618, Percent_Identity=44.1747572815534, Blast_Score=467, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 59644; Mature: 59644
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00721 FTHFS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDMDISRRAHLKDIAALGAEFGLLPDEMQLFGKTKAKVDLRAQQRLAEQQQGKLIIVT CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEE AVTPTPHGEGKTVTTIGLTQSLKALGNKVCACIRQPSMGPVFGVKGGAAGGGYAQVVPMQ EECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEHH ELNLHLTGDIHAVSSAHNLGAAAIASRLYHETRLGKAEFESQSGQNYLDIAPNGIRWHRV HCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCEEEEEE VDHNDRCLREIEVGLGENNGPAYTSGFDITAASELMAILALSRNLADMRARIGKLVLAVN ECCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEE RQGAAISAEDLGVAGAMTAIMADAVKPTLMQTLNGAPCLIHAGPFANIAHGNSSVIADDI CCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCEEHHHH ALKLADFVVTEGGFGSDMGFEKFCNIKARQSGLAPSAAVLVTTLKALKANSGLTSDADIN HHHHHHHHEECCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC APDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDTDAELNWLIEAVAGTAAFGCEL CCCHHHHHCCCEEEEEEECCHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCH SEAFSQGEAGALTLAQTVMRACEQPSEFTLLYPDEMALEAKLSTLAEVGYGATGVSLSEA HHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHH AKLQLQELSALGYADLPVCMAKTPLSISHDPQLKGVPQGFIVPVRELVLNAGAGFITALV HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH GNVMTMPGLGLVPGYLKVDIGADGEITGLG HHHHHCCCCCCCCCEEEEEECCCCCEECCC >Mature Secondary Structure MLTDMDISRRAHLKDIAALGAEFGLLPDEMQLFGKTKAKVDLRAQQRLAEQQQGKLIIVT CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEHHHHHHHHHHHHCCCEEEEE AVTPTPHGEGKTVTTIGLTQSLKALGNKVCACIRQPSMGPVFGVKGGAAGGGYAQVVPMQ EECCCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCEEEEEHH ELNLHLTGDIHAVSSAHNLGAAAIASRLYHETRLGKAEFESQSGQNYLDIAPNGIRWHRV HCCEEEECCEEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEECCCCEEEEEE VDHNDRCLREIEVGLGENNGPAYTSGFDITAASELMAILALSRNLADMRARIGKLVLAVN ECCCHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEE RQGAAISAEDLGVAGAMTAIMADAVKPTLMQTLNGAPCLIHAGPFANIAHGNSSVIADDI CCCCEECHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEECCCCCCEEHHHH ALKLADFVVTEGGFGSDMGFEKFCNIKARQSGLAPSAAVLVTTLKALKANSGLTSDADIN HHHHHHHHEECCCCCCCCCHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC APDQARLEAGFANLNWHINNVARYGIPVVVAINRFATDTDAELNWLIEAVAGTAAFGCEL CCCHHHHHCCCEEEEEEECCHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCH SEAFSQGEAGALTLAQTVMRACEQPSEFTLLYPDEMALEAKLSTLAEVGYGATGVSLSEA HHHHCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHH AKLQLQELSALGYADLPVCMAKTPLSISHDPQLKGVPQGFIVPVRELVLNAGAGFITALV HHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHH GNVMTMPGLGLVPGYLKVDIGADGEITGLG HHHHHCCCCCCCCCEEEEEECCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]