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The map label for this gene is bphB [H]

Identifier: 117918996

GI number: 117918996

Start: 636365

End: 638524

Strand: Direct

Name: bphB [H]

Synonym: Shewana3_0542

Alternate gene names: 117918996

Gene position: 636365-638524 (Clockwise)

Preceding gene: 117918994

Following gene: 117918997

Centisome position: 12.8

GC content: 47.08

Gene sequence:

>2160_bases
ATGGACAAGGATAGTTTCCCTGATTCTTTCAACTTCAACAGCTCTAAAAGCTTTTATGCCAGTGTGATCAGCTCCAGTTG
GTTGATGTTACTCGCCGCCGTCTTTTTTATGGGGCTCTCTTGGTATGTGCTTGAAGAATATTTACGAGATCGGGGTGATG
AGCGTTTTAACAATAATGTTCAAGATCTTATTGGTGCCGTCAGCAGTCGTATGACTGCCTATGAGCAGGTATTACGAGGC
GGCGTAGGACTATTTCTCGCCTCGGATGGAGTGTCTCGCCGTGAATGGCAACTCTATGTTTCTAATGCTCGTTTATCCGA
ATATTACCCCGGGATTCAAGGCTTAGGCTTTGCGCAACTCTTAACGCCTGCAACTGTGGAGGCTTTTACTCAAGAAGTGC
AAGAGGAAGGATTCGATGACTATAGAGTGACCCCTGTTGGGGACAGAGATCTCTATTGTGCGATTAAGTACTTAGAACCA
TTTGACTGGCGCAATCAACGGGCATTTGGCTTCGATATGTGCTCCGAATCAACCCGCAGGGCTGCCATCTTACACGCCAT
TGCCACAGGGCTCCCCACCGCATCGGGTAAAGTGACTCTAGTGCAAGAAACCCCTGATGATGCGCAAGCCGGTATTTTAA
TGTATGTCCCGTTATACCGCGGTCAGCCGATGACGGAGGAAGAACGTAAGCAACAGGCCATCGGCGTGGTGTACGCCCCA
TTCCGTATGAATGATCTGATGCAAGGCATTATGGGGAAACGTTTTTCGGGATTAAAACTGGCGATTTACGATGGTATGGA
GGCCAACAACGAGAGCCTGATGTTTAGCAGCCATAAAGCCTTGCCCTCTACAAATGATGTGTTTTATCAATCCCAGCTAG
AAACCATGGAAGGCCAAGTTTGGCGTTTAGAGGTGTCCTCTGAATCACGCTTTATCTCAAGCGCGGAACAAACCCAAAGT
GTGTGGCTTCAGGTTATTGGGAGTGCGTTTATCTTAGCCTTGTTTTACTCAGTGCTGACGATGGCGCGAAATCGTTATCA
AGAGTCGAGGTTAACCGCAGAGTTAATTGCCAATGAAAAACGCTTCCGCCTCGTGATTGAAGCTTCACCTAGTGCGCTCT
TTATGGTGGATAGAAAAGGCATTATCACCTTAGTGAACACCCATGCCGAACGCCTCTTTGGTTACGCACGGGATGAGTTA
CTCGGGCGTTCAATCAATATGTTATTACCCGAGGGGTTAAGGGAAATACATCAGCAACATATGGGCAGTTACCTCGCCCA
ACCGATTGCGAAAAACATGTCACTGCGGGACGACTTGTTCGGTTGTTGCAAAGATGGGACTCGCTTGGCGATTGAAGTTG
GGCTAACACCGATTCACTTCAGCAATGGCGTGTCGATTCTGGCAACGATAAACAATGTGTCGGAGCGTAAACGGATCGAA
GCGCAAAGGATTGAGCATACGGCTGAACTTGAGCGCATCAACAAGGAACTCGACCAGTTTGCTTATATCGCTTCTCACGA
TCTTAAGTCGCCACTGCGGGGTATTGAACAGCTAACGAGTTGGTTAAGTGAAGATTTGTCTGAGAACATGGACGAAAACG
TTCAAAAATACTTAGGGTTAATCCAAAGTCGTATCCAACGTATGGTGTTGCTACTCGATGGTTTGCTGATGTTTTCGCGG
ATTGGGCGAGTCGATGCGGAGATTGTCGATGTCGATTCACGGCAACTGATTGAGGATATGTTCGCCTTAGTCGCACCGCC
GCAGGGCTTTTCCCTCGAGCTCGAAGGAAATTTCCCACAATTTAAAACCGTAAAAACTCTGCTCGAATTAGTGATAAGGA
ATTTATTCAGTAATGCGATTAAACACCATGATCAGGCTGAAGGTGTGATTAAAGTGGTGTGTAGTGCCTCCAACACCCAT
TACTGGTTTAGTGTTATCGATGATGGTCCAGGCATATCCACTAAATACCATGGCAAGGTATTTGAGATGTTCCAAACGCT
TAGGCCGAGGGATGAAGTGGAGGGGAGCGGTTTAGGTTTGTCGCTAGTCAAAAAGACGGTAGAAAGTCTTGGTGGAAAAA
TTCAACTAGAATCAGAGGGACGTGGTTGTTGTTTTCGATTTAGCTGGCCGATGCGCATAGTCAACAAGGAGGGGATATGA

Upstream 100 bases:

>100_bases
AATTCCTACTTAAATAGTCGGATAGACTTGAATTTGCCTAAAACACCAACAACACTTGGATCAGTGTTTAATCTTCTTCA
ATGCTAGGGATTTAGCGGGT

Downstream 100 bases:

>100_bases
GCAGCACCAATAACTACAAACAAGTGACGATTTTGTTGGTCGATGACGATGATGTGGATTATATGGCGGTGCAGCGGGCG
ATGAAGCAACTGAGATTGCT

Product: multi-sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MDKDSFPDSFNFNSSKSFYASVISSSWLMLLAAVFFMGLSWYVLEEYLRDRGDERFNNNVQDLIGAVSSRMTAYEQVLRG
GVGLFLASDGVSRREWQLYVSNARLSEYYPGIQGLGFAQLLTPATVEAFTQEVQEEGFDDYRVTPVGDRDLYCAIKYLEP
FDWRNQRAFGFDMCSESTRRAAILHAIATGLPTASGKVTLVQETPDDAQAGILMYVPLYRGQPMTEEERKQQAIGVVYAP
FRMNDLMQGIMGKRFSGLKLAIYDGMEANNESLMFSSHKALPSTNDVFYQSQLETMEGQVWRLEVSSESRFISSAEQTQS
VWLQVIGSAFILALFYSVLTMARNRYQESRLTAELIANEKRFRLVIEASPSALFMVDRKGIITLVNTHAERLFGYARDEL
LGRSINMLLPEGLREIHQQHMGSYLAQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIE
AQRIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTSWLSEDLSENMDENVQKYLGLIQSRIQRMVLLLDGLLMFSR
IGRVDAEIVDVDSRQLIEDMFALVAPPQGFSLELEGNFPQFKTVKTLLELVIRNLFSNAIKHHDQAEGVIKVVCSASNTH
YWFSVIDDGPGISTKYHGKVFEMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMRIVNKEGI

Sequences:

>Translated_719_residues
MDKDSFPDSFNFNSSKSFYASVISSSWLMLLAAVFFMGLSWYVLEEYLRDRGDERFNNNVQDLIGAVSSRMTAYEQVLRG
GVGLFLASDGVSRREWQLYVSNARLSEYYPGIQGLGFAQLLTPATVEAFTQEVQEEGFDDYRVTPVGDRDLYCAIKYLEP
FDWRNQRAFGFDMCSESTRRAAILHAIATGLPTASGKVTLVQETPDDAQAGILMYVPLYRGQPMTEEERKQQAIGVVYAP
FRMNDLMQGIMGKRFSGLKLAIYDGMEANNESLMFSSHKALPSTNDVFYQSQLETMEGQVWRLEVSSESRFISSAEQTQS
VWLQVIGSAFILALFYSVLTMARNRYQESRLTAELIANEKRFRLVIEASPSALFMVDRKGIITLVNTHAERLFGYARDEL
LGRSINMLLPEGLREIHQQHMGSYLAQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIE
AQRIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTSWLSEDLSENMDENVQKYLGLIQSRIQRMVLLLDGLLMFSR
IGRVDAEIVDVDSRQLIEDMFALVAPPQGFSLELEGNFPQFKTVKTLLELVIRNLFSNAIKHHDQAEGVIKVVCSASNTH
YWFSVIDDGPGISTKYHGKVFEMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMRIVNKEGI
>Mature_719_residues
MDKDSFPDSFNFNSSKSFYASVISSSWLMLLAAVFFMGLSWYVLEEYLRDRGDERFNNNVQDLIGAVSSRMTAYEQVLRG
GVGLFLASDGVSRREWQLYVSNARLSEYYPGIQGLGFAQLLTPATVEAFTQEVQEEGFDDYRVTPVGDRDLYCAIKYLEP
FDWRNQRAFGFDMCSESTRRAAILHAIATGLPTASGKVTLVQETPDDAQAGILMYVPLYRGQPMTEEERKQQAIGVVYAP
FRMNDLMQGIMGKRFSGLKLAIYDGMEANNESLMFSSHKALPSTNDVFYQSQLETMEGQVWRLEVSSESRFISSAEQTQS
VWLQVIGSAFILALFYSVLTMARNRYQESRLTAELIANEKRFRLVIEASPSALFMVDRKGIITLVNTHAERLFGYARDEL
LGRSINMLLPEGLREIHQQHMGSYLAQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIE
AQRIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTSWLSEDLSENMDENVQKYLGLIQSRIQRMVLLLDGLLMFSR
IGRVDAEIVDVDSRQLIEDMFALVAPPQGFSLELEGNFPQFKTVKTLLELVIRNLFSNAIKHHDQAEGVIKVVCSASNTH
YWFSVIDDGPGISTKYHGKVFEMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMRIVNKEGI

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=371, Percent_Identity=26.1455525606469, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI48994928, Length=362, Percent_Identity=24.3093922651934, Blast_Score=82, Evalue=2e-16,
Organism=Escherichia coli, GI1790436, Length=238, Percent_Identity=28.9915966386555, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1789808, Length=223, Percent_Identity=25.1121076233184, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87082128, Length=241, Percent_Identity=26.1410788381743, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1788713, Length=267, Percent_Identity=25.4681647940075, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 81265; Mature: 81265

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS50839 CHASE ; PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDSFPDSFNFNSSKSFYASVISSSWLMLLAAVFFMGLSWYVLEEYLRDRGDERFNNNV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCCH
QDLIGAVSSRMTAYEQVLRGGVGLFLASDGVSRREWQLYVSNARLSEYYPGIQGLGFAQL
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCHHHHCCCCCCCCHHHH
LTPATVEAFTQEVQEEGFDDYRVTPVGDRDLYCAIKYLEPFDWRNQRAFGFDMCSESTRR
HCHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCHHHH
AAILHAIATGLPTASGKVTLVQETPDDAQAGILMYVPLYRGQPMTEEERKQQAIGVVYAP
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCEEECC
FRMNDLMQGIMGKRFSGLKLAIYDGMEANNESLMFSSHKALPSTNDVFYQSQLETMEGQV
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCE
WRLEVSSESRFISSAEQTQSVWLQVIGSAFILALFYSVLTMARNRYQESRLTAELIANEK
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RFRLVIEASPSALFMVDRKGIITLVNTHAERLFGYARDELLGRSINMLLPEGLREIHQQH
EEEEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MGSYLAQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIE
HHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEHHHHHHHHHHH
AQRIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTSWLSEDLSENMDENVQKYLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSRIQRMVLLLDGLLMFSRIGRVDAEIVDVDSRQLIEDMFALVAPPQGFSLELEGNFPQ
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCH
FKTVKTLLELVIRNLFSNAIKHHDQAEGVIKVVCSASNTHYWFSVIDDGPGISTKYHGKV
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHH
FEMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMRIVNKEGI
HHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCHHCCCCCCC
>Mature Secondary Structure
MDKDSFPDSFNFNSSKSFYASVISSSWLMLLAAVFFMGLSWYVLEEYLRDRGDERFNNNV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHCCCH
QDLIGAVSSRMTAYEQVLRGGVGLFLASDGVSRREWQLYVSNARLSEYYPGIQGLGFAQL
HHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEEECCCHHHHCCCCCCCCHHHH
LTPATVEAFTQEVQEEGFDDYRVTPVGDRDLYCAIKYLEPFDWRNQRAFGFDMCSESTRR
HCHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEECCCCCCCCCCCCCHHHHCCHHHH
AAILHAIATGLPTASGKVTLVQETPDDAQAGILMYVPLYRGQPMTEEERKQQAIGVVYAP
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCEEECC
FRMNDLMQGIMGKRFSGLKLAIYDGMEANNESLMFSSHKALPSTNDVFYQSQLETMEGQV
HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCE
WRLEVSSESRFISSAEQTQSVWLQVIGSAFILALFYSVLTMARNRYQESRLTAELIANEK
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RFRLVIEASPSALFMVDRKGIITLVNTHAERLFGYARDELLGRSINMLLPEGLREIHQQH
EEEEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
MGSYLAQPIAKNMSLRDDLFGCCKDGTRLAIEVGLTPIHFSNGVSILATINNVSERKRIE
HHHHHHHHHHHCCCHHHHHHHHCCCCCEEEEEECCCEEEECCCCEEEEEHHHHHHHHHHH
AQRIEHTAELERINKELDQFAYIASHDLKSPLRGIEQLTSWLSEDLSENMDENVQKYLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQSRIQRMVLLLDGLLMFSRIGRVDAEIVDVDSRQLIEDMFALVAPPQGFSLELEGNFPQ
HHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCH
FKTVKTLLELVIRNLFSNAIKHHDQAEGVIKVVCSASNTHYWFSVIDDGPGISTKYHGKV
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCEEEEEEEECCCCCCCCCCHHH
FEMFQTLRPRDEVEGSGLGLSLVKKTVESLGGKIQLESEGRGCCFRFSWPMRIVNKEGI
HHHHHHHCCCHHCCCCCCHHHHHHHHHHHCCCEEEEECCCCCEEEEEECCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]