Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918994
Identifier: 117918994
GI number: 117918994
Start: 634806
End: 635768
Strand: Direct
Name: 117918994
Synonym: Shewana3_0540
Alternate gene names: NA
Gene position: 634806-635768 (Clockwise)
Preceding gene: 117918992
Following gene: 117918996
Centisome position: 12.77
GC content: 47.14
Gene sequence:
>963_bases ATGGCTGCAATGAGCTATTTGAGTGTGATTGAGCGTTATCACGAGTATGAGGCCACAGTGCATGAGCTGATGGAGTCTAT TTTAACGGGCATTGCCGATGCGGACTTATTTCACCAACCAAAAGTCGATATCAAGGCCATGAAGGGTATTGCGGGTAGTT ATCCCTTTGTCGAGCTGATGTATTTGCTCGATACCCAAGGGGTGCAAATTAGCCAAAATATCGCAGTGGTCGATCAGCAG ATCAAGTTAGTGCCCCTTGGCGGTAATCGCGACCGTAGTCAACGGCCCTATTTTACCAATAGGGATGAGTCTGATGGGGT TAATATCACTCGCCCTTATTTATCCAATGCCAGCGGGAACTTATGTTTATCGGCCTCCTTAGCGATTGTGCAGCAGGAGC AAAAGCTGGGCTATCTAGTCGTCGATGTGGATTTGACGCGAATGATTGAATTTATGATGGGCGACAGTGCTCGTCGGCGG GTCACACCAGCCTTTAAAGCCGTGTATGGCGTGATAGTCGCAGGGCTTTTTGTGCTGGTGATGGTGCTACTATGGACGGC GCTCAGGGATATTTATGGGTTATTTGTGGTGGAGCAAGTCGGGCAAGACCCATTGCAACCCTTTGGGATCATTATCTTTA TGACCTTAGCGTTAGCGATCTTCGACCTCGGGAAAACAATTCTGGAGGAAGAAGTATTAATGCATAAGGATATTTTTCGT CATAGCTCCACCCGCCGAACCATCACTCGCTTTGTATCAACGATTTTGATCGCCATTTCAATTGAGGCCTTATTGACCAT GTTTAAGGCGTCACTGGGGGAGAAACAATATATCGAGCCGGCGATTTGGATGATGCTTGCTGTAGTGGGTTTATTAGTCG GATTAGGGGCTTATGTGTATCTTGGGGCAAAAGCGGAATGGCTGCTGATCAAAACTCAGGCCTATAAGAGTGGCAAAAAG TAA
Upstream 100 bases:
>100_bases GTTTAATCTCATAACTCATTGTTAAACATTAACTTATTTTGCTGGCATCAAAGCTGCTTTTCGTGTGTGAACAATCGGAT AACGTCAATGGGAGAGAGTT
Downstream 100 bases:
>100_bases TATCAAAATAATAGTAAACTGTACACCCAGCCCCTAGGAGCTGGGTGAGGCTTTTAGAAAAACGCAGGTTTTGAGTAACC TAACGCCTTAAGGGAACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: General Glycosylation Pathway Protein PglG; Inner Membrane Protein; Cache Domain Protein
Number of amino acids: Translated: 320; Mature: 319
Protein sequence:
>320_residues MAAMSYLSVIERYHEYEATVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELMYLLDTQGVQISQNIAVVDQQ IKLVPLGGNRDRSQRPYFTNRDESDGVNITRPYLSNASGNLCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRR VTPAFKAVYGVIVAGLFVLVMVLLWTALRDIYGLFVVEQVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK
Sequences:
>Translated_320_residues MAAMSYLSVIERYHEYEATVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELMYLLDTQGVQISQNIAVVDQQ IKLVPLGGNRDRSQRPYFTNRDESDGVNITRPYLSNASGNLCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRR VTPAFKAVYGVIVAGLFVLVMVLLWTALRDIYGLFVVEQVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK >Mature_319_residues AAMSYLSVIERYHEYEATVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELMYLLDTQGVQISQNIAVVDQQI KLVPLGGNRDRSQRPYFTNRDESDGVNITRPYLSNASGNLCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRRV TPAFKAVYGVIVAGLFVLVMVLLWTALRDIYGLFVVEQVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFRH SSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVYLGAKAEWLLIKTQAYKSGKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35771; Mature: 35639
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAMSYLSVIERYHEYEATVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCCCCHHHHHH YLLDTQGVQISQNIAVVDQQIKLVPLGGNRDRSQRPYFTNRDESDGVNITRPYLSNASGN HHHHCCCCEEECCHHEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCC LCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRRVTPAFKAVYGVIVAGLFVLV EEEHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH MVLLWTALRDIYGLFVVEQVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHEE LGAKAEWLLIKTQAYKSGKK ECCCCEEEEEEEHHHCCCCC >Mature Secondary Structure AAMSYLSVIERYHEYEATVHELMESILTGIADADLFHQPKVDIKAMKGIAGSYPFVELM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHCCCCCCHHHHHH YLLDTQGVQISQNIAVVDQQIKLVPLGGNRDRSQRPYFTNRDESDGVNITRPYLSNASGN HHHHCCCCEEECCHHEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEECHHHCCCCCC LCLSASLAIVQQEQKLGYLVVDVDLTRMIEFMMGDSARRRVTPAFKAVYGVIVAGLFVLV EEEHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHH MVLLWTALRDIYGLFVVEQVGQDPLQPFGIIIFMTLALAIFDLGKTILEEEVLMHKDIFR HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSSTRRTITRFVSTILIAISIEALLTMFKASLGEKQYIEPAIWMMLAVVGLLVGLGAYVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHEE LGAKAEWLLIKTQAYKSGKK ECCCCEEEEEEEHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA