Click here to switch to the map view.

The map label for this gene is 117918981

Identifier: 117918981

GI number: 117918981

Start: 618531

End: 620195

Strand: Direct

Name: 117918981

Synonym: Shewana3_0527

Alternate gene names: NA

Gene position: 618531-620195 (Clockwise)

Preceding gene: 117918980

Following gene: 117918983

Centisome position: 12.44

GC content: 48.17

Gene sequence:

>1665_bases
ATGGTATACGGTGTACAGGCTACGGTAGATAAGGTCGAGCTGGATGGTAATATTGTCAAACAGACTACACTCGATGATTG
GCAAACGATTAACTTAGGTAGCAGTACAGCGAATGTCACCACAGGAGTGATTGCCGACTTGCCACCACAAACGATTTTTT
GGAAAGGGGGCTCGAAAGACACCTTAGATGTGACCGAATGGTGGTACAAAGACGGTGCCGTACCCGATAAGGATGACCTG
CGCAATGGATATGCAGCTGCCTATTTTATTAATAACGGCAGTGGTAGTGATGACTTAGTGTTTTACTTTGGTGCTGAGCG
TTATGCCAACAATGGTGACGCTATTATGGGATTTTGGTTCTTCCAAGATAAAGTCGGCCCTGGCCCAGGTAATAAATTTA
CCGGACAACACCAAGAAAACGACTTATTTATCATCATGGAATACCCTCAGGATTCGAACTCTGTGCCCTTTGTACAAGTG
ATGCGCTGGGTGAATTCGGGTGGTGATGTCTCTGAACATTTAGAACTGCTCTATGCCTCTGGCGACGCCGGAGCCAAATG
TTTATCCGCAGGTGATACTGGCGTTGCCTGCGCCATTACCAATGAAAACTCCGAACTTGCTGGCGTGGCCAATGGTTTGT
GGCCCTATGAAAACAAAGCGGGCATACCTAACACTTATCCCTATGAATCCTTCTTCGAAGGTCGTTTGAATGTAACCCAA
GCCTTCTTGGCTGCGGGTGTGAATGAGATCCCTTGTTTTAGCAGCTTCTTGATTGAAACCCGGTCGTCTCGTTCTGAAAC
CGCCCAATTGAAGGACTTTTTGGGTGGCGATTTCCCTCTCTGTAGTATTGCGATTTCGAAAACCTGTAGTGCGACTGAGC
TGACCGGTAGTAATCAATTCCGTATCGATTACACTTTGCAACTCACTAATACTGGGGTCGGTAGCATTGGTGCCGGTGAA
ACTGTCACCATCAACGATACACCTAGCAACGGTACCGCCTTTAGCATTAGCCAAGCCTTGAGCGCGTTTGCTAATGGTGC
TGATGGTTGGGCTCCTAACGAAATGCTGACCTATACAGGGTATTACATCTCTGATGTGAATGGTGGTACTAACACTGTCG
ATGCCAGTGTGAGCTTTGGCTCTGCTAGCATTAGCGCCGATCCCTACACTGCAACCTGCGATTCGTTGGCGTTGAGTCCT
ATGTTGTCCATTGTGAAAAACTGTAGCGTATCATTGGCAGAAAACAGCGGTTTGGTCGCTCTGCGAAAAGACTACGACAT
TACCGTCTGTAACACGGGGGACGCACCGTTGGATGTCTCTCTGACCGACTCTGTGGACAGTAGTTTAAATGCCACATTCA
GTTTGGATTTTGCGAAACAGTGCTTGACCAACAACGATTGCGGCTCGGGTTATAGCTGCGATGGTAACAGCCTAATGTGT
ACTAATACGGCGGGTGAAGTGGAAGGTAACTTTGGGGGAAATGTTTGTGAGTTAACCCAAAGCCATTACTTCCCAAGCAC
ATTACCCACAGGTGCCGACGGTACTTTGTCTAACACCGCAACGGCGAGGGCGACTTCTCCTGTGGTCGATACGGGCGATT
TAGCGACAATTGGTAACTCGGATACCGCGAGCTGCGACTTGTGTCCATTACCCGTGCAAGAATAG

Upstream 100 bases:

>100_bases
GGTTGGTGGGTGCAGCGGGATTCCGTCCACAGGAAATGAGGAGAATGTTATGAAACTCAAATTATTGTTTCGTACCCTTC
TACTTTGGGTCTGCACATTG

Downstream 100 bases:

>100_bases
TTAACTGAGTTGTGTATTAGCAAAAAGGGCCGTCATTACGGCCCTTTTTATTTGCTCATATTATCTATTTTTACCTTTGC
CACCAGTACTTGTGCTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MVYGVQATVDKVELDGNIVKQTTLDDWQTINLGSSTANVTTGVIADLPPQTIFWKGGSKDTLDVTEWWYKDGAVPDKDDL
RNGYAAAYFINNGSGSDDLVFYFGAERYANNGDAIMGFWFFQDKVGPGPGNKFTGQHQENDLFIIMEYPQDSNSVPFVQV
MRWVNSGGDVSEHLELLYASGDAGAKCLSAGDTGVACAITNENSELAGVANGLWPYENKAGIPNTYPYESFFEGRLNVTQ
AFLAAGVNEIPCFSSFLIETRSSRSETAQLKDFLGGDFPLCSIAISKTCSATELTGSNQFRIDYTLQLTNTGVGSIGAGE
TVTINDTPSNGTAFSISQALSAFANGADGWAPNEMLTYTGYYISDVNGGTNTVDASVSFGSASISADPYTATCDSLALSP
MLSIVKNCSVSLAENSGLVALRKDYDITVCNTGDAPLDVSLTDSVDSSLNATFSLDFAKQCLTNNDCGSGYSCDGNSLMC
TNTAGEVEGNFGGNVCELTQSHYFPSTLPTGADGTLSNTATARATSPVVDTGDLATIGNSDTASCDLCPLPVQE

Sequences:

>Translated_554_residues
MVYGVQATVDKVELDGNIVKQTTLDDWQTINLGSSTANVTTGVIADLPPQTIFWKGGSKDTLDVTEWWYKDGAVPDKDDL
RNGYAAAYFINNGSGSDDLVFYFGAERYANNGDAIMGFWFFQDKVGPGPGNKFTGQHQENDLFIIMEYPQDSNSVPFVQV
MRWVNSGGDVSEHLELLYASGDAGAKCLSAGDTGVACAITNENSELAGVANGLWPYENKAGIPNTYPYESFFEGRLNVTQ
AFLAAGVNEIPCFSSFLIETRSSRSETAQLKDFLGGDFPLCSIAISKTCSATELTGSNQFRIDYTLQLTNTGVGSIGAGE
TVTINDTPSNGTAFSISQALSAFANGADGWAPNEMLTYTGYYISDVNGGTNTVDASVSFGSASISADPYTATCDSLALSP
MLSIVKNCSVSLAENSGLVALRKDYDITVCNTGDAPLDVSLTDSVDSSLNATFSLDFAKQCLTNNDCGSGYSCDGNSLMC
TNTAGEVEGNFGGNVCELTQSHYFPSTLPTGADGTLSNTATARATSPVVDTGDLATIGNSDTASCDLCPLPVQE
>Mature_554_residues
MVYGVQATVDKVELDGNIVKQTTLDDWQTINLGSSTANVTTGVIADLPPQTIFWKGGSKDTLDVTEWWYKDGAVPDKDDL
RNGYAAAYFINNGSGSDDLVFYFGAERYANNGDAIMGFWFFQDKVGPGPGNKFTGQHQENDLFIIMEYPQDSNSVPFVQV
MRWVNSGGDVSEHLELLYASGDAGAKCLSAGDTGVACAITNENSELAGVANGLWPYENKAGIPNTYPYESFFEGRLNVTQ
AFLAAGVNEIPCFSSFLIETRSSRSETAQLKDFLGGDFPLCSIAISKTCSATELTGSNQFRIDYTLQLTNTGVGSIGAGE
TVTINDTPSNGTAFSISQALSAFANGADGWAPNEMLTYTGYYISDVNGGTNTVDASVSFGSASISADPYTATCDSLALSP
MLSIVKNCSVSLAENSGLVALRKDYDITVCNTGDAPLDVSLTDSVDSSLNATFSLDFAKQCLTNNDCGSGYSCDGNSLMC
TNTAGEVEGNFGGNVCELTQSHYFPSTLPTGADGTLSNTATARATSPVVDTGDLATIGNSDTASCDLCPLPVQE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58505; Mature: 58505

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYGVQATVDKVELDGNIVKQTTLDDWQTINLGSSTANVTTGVIADLPPQTIFWKGGSKD
CEEECEEEEEEEEECCCEEEEEECCCCEEEECCCCCCCEEECEEECCCCCEEEECCCCCC
TLDVTEWWYKDGAVPDKDDLRNGYAAAYFINNGSGSDDLVFYFGAERYANNGDAIMGFWF
CCCHHHHHHCCCCCCCHHHHCCCEEEEEEEECCCCCCCEEEEECCHHCCCCCCEEEEEEE
FQDKVGPGPGNKFTGQHQENDLFIIMEYPQDSNSVPFVQVMRWVNSGGDVSEHLELLYAS
EECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEEEEC
GDAGAKCLSAGDTGVACAITNENSELAGVANGLWPYENKAGIPNTYPYESFFEGRLNVTQ
CCCCCEEEECCCCCEEEEEECCCCCEEEHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHH
AFLAAGVNEIPCFSSFLIETRSSRSETAQLKDFLGGDFPLCSIAISKTCSATELTGSNQF
HHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCEE
RIDYTLQLTNTGVGSIGAGETVTINDTPSNGTAFSISQALSAFANGADGWAPNEMLTYTG
EEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEE
YYISDVNGGTNTVDASVSFGSASISADPYTATCDSLALSPMLSIVKNCSVSLAENSGLVA
EEEEECCCCCCEEEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCEEE
LRKDYDITVCNTGDAPLDVSLTDSVDSSLNATFSLDFAKQCLTNNDCGSGYSCDGNSLMC
EECCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCEEE
TNTAGEVEGNFGGNVCELTQSHYFPSTLPTGADGTLSNTATARATSPVVDTGDLATIGNS
ECCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
DTASCDLCPLPVQE
CCCCCCCCCCCCCC
>Mature Secondary Structure
MVYGVQATVDKVELDGNIVKQTTLDDWQTINLGSSTANVTTGVIADLPPQTIFWKGGSKD
CEEECEEEEEEEEECCCEEEEEECCCCEEEECCCCCCCEEECEEECCCCCEEEECCCCCC
TLDVTEWWYKDGAVPDKDDLRNGYAAAYFINNGSGSDDLVFYFGAERYANNGDAIMGFWF
CCCHHHHHHCCCCCCCHHHHCCCEEEEEEEECCCCCCCEEEEECCHHCCCCCCEEEEEEE
FQDKVGPGPGNKFTGQHQENDLFIIMEYPQDSNSVPFVQVMRWVNSGGDVSEHLELLYAS
EECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCHHHEEEEEEEC
GDAGAKCLSAGDTGVACAITNENSELAGVANGLWPYENKAGIPNTYPYESFFEGRLNVTQ
CCCCCEEEECCCCCEEEEEECCCCCEEEHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHH
AFLAAGVNEIPCFSSFLIETRSSRSETAQLKDFLGGDFPLCSIAISKTCSATELTGSNQF
HHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCEEECCCCEE
RIDYTLQLTNTGVGSIGAGETVTINDTPSNGTAFSISQALSAFANGADGWAPNEMLTYTG
EEEEEEEEECCCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHHHCCCCCCCCCCEEEEEE
YYISDVNGGTNTVDASVSFGSASISADPYTATCDSLALSPMLSIVKNCSVSLAENSGLVA
EEEEECCCCCCEEEEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEECCCCEEE
LRKDYDITVCNTGDAPLDVSLTDSVDSSLNATFSLDFAKQCLTNNDCGSGYSCDGNSLMC
EECCCEEEEECCCCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCEEE
TNTAGEVEGNFGGNVCELTQSHYFPSTLPTGADGTLSNTATARATSPVVDTGDLATIGNS
ECCCCCCCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
DTASCDLCPLPVQE
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA