Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918969
Identifier: 117918969
GI number: 117918969
Start: 604093
End: 604542
Strand: Direct
Name: 117918969
Synonym: Shewana3_0515
Alternate gene names: NA
Gene position: 604093-604542 (Clockwise)
Preceding gene: 117918968
Following gene: 117918970
Centisome position: 12.15
GC content: 51.11
Gene sequence:
>450_bases ATGGTGACCCTACTGATAGCCATTATCGTGCTGCAATTTGCGGGAGCGAATTTGGGTGCGCATCAGTTACATGCGGGTAA TGGCGCCGAAGAAGCCGAAAATCATCCCCATCTCCAATTTAGTGCTCCCGTGACCACCTTAGCCCAATGTGTGGATTGTG TGTGTGCCAATGAGCAGACTCCCGGATTCAGCGCCGAGCAGTTTGGCGAAGCCGCATTCAAGGCGGGTGTATCGACTGCC AGTGCTAGTGGCCATTCACATTTAGTGCAAACCACTGAAATTCAAAATTTTGATCTTTGCCTCGATTGCCAGTGTCACGG CGGTCATGTGGCGCTGCTATCCCATTCCGACAGCCAAACGTCGATCGCGTTTGAAACGGCTTATGTACCAACGGATTTAG CCTATTTCCCACCTGATCAATTACCTAAGTACCGCCCTCCCATCGCTTAA
Upstream 100 bases:
>100_bases AAAATCCCTGTCTGAAGTTTGCACAAGCTATTGCTTAACAACCTACTGAATCGTCCAAAGGTGATATTTGATTTCGACCG CCAAGCCATTCTTTAGCCGA
Downstream 100 bases:
>100_bases CCTTCAATATCTGCTTATCGCTTCGTTATTGTGCGCCGCCATAAGCCCTTAATTTATCCCCAACGCATCGATAACTGGTC TACACGGCCTTGGCTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAPVTTLAQCVDCVCANEQTPGFSAEQFGEAAFKAGVSTA SASGHSHLVQTTEIQNFDLCLDCQCHGGHVALLSHSDSQTSIAFETAYVPTDLAYFPPDQLPKYRPPIA
Sequences:
>Translated_149_residues MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAPVTTLAQCVDCVCANEQTPGFSAEQFGEAAFKAGVSTA SASGHSHLVQTTEIQNFDLCLDCQCHGGHVALLSHSDSQTSIAFETAYVPTDLAYFPPDQLPKYRPPIA >Mature_149_residues MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAPVTTLAQCVDCVCANEQTPGFSAEQFGEAAFKAGVSTA SASGHSHLVQTTEIQNFDLCLDCQCHGGHVALLSHSDSQTSIAFETAYVPTDLAYFPPDQLPKYRPPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15760; Mature: 15760
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAPVTTLAQCVDCVCANEQT CHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCC PGFSAEQFGEAAFKAGVSTASASGHSHLVQTTEIQNFDLCLDCQCHGGHVALLSHSDSQT CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC SIAFETAYVPTDLAYFPPDQLPKYRPPIA EEEEEEEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTLLIAIIVLQFAGANLGAHQLHAGNGAEEAENHPHLQFSAPVTTLAQCVDCVCANEQT CHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEECCHHHHHHHHHHHHCCCCC PGFSAEQFGEAAFKAGVSTASASGHSHLVQTTEIQNFDLCLDCQCHGGHVALLSHSDSQT CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCEEEEEEECCCEEEEEECCCCCC SIAFETAYVPTDLAYFPPDQLPKYRPPIA EEEEEEEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA