Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918968
Identifier: 117918968
GI number: 117918968
Start: 603725
End: 603928
Strand: Direct
Name: 117918968
Synonym: Shewana3_0514
Alternate gene names: NA
Gene position: 603725-603928 (Clockwise)
Preceding gene: 117918967
Following gene: 117918969
Centisome position: 12.14
GC content: 47.06
Gene sequence:
>204_bases ATGTCTTTGTTGAAAACTATGACTGCCAAACCGACCGCTAAATTAGGCGCTATCGCCTTAGTATTGGCCTTTACCGCAGG CTTAAGTGCCTGTGCGCCAGAGGTCGGTAGTGATGCTTGGTGTAAGCAAATGAAGGATAAACCTTCAGGTGATTGGACGG CGAACGAAGCTGCCGATTACGCTAAACACTGTGTGTTTAAGTAA
Upstream 100 bases:
>100_bases TTGGTTCCCTTTAGAACAAAAAGCCAAAGCTATCGACTGGATTGCGAAACGTTCAACTTTTTAACGGCCCATGGTGGGTA TTACTTATAAGGAATTAACT
Downstream 100 bases:
>100_bases GCTTTTCAAGCGAATAGTGTCACAGCTTGGCTGATTTTTAGTTGCAAGCTGTGAACTTATGCTTAAAATCCCTGTCTGAA GTTTGCACAAGCTATTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 67; Mature: 66
Protein sequence:
>67_residues MSLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADYAKHCVFK
Sequences:
>Translated_67_residues MSLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADYAKHCVFK >Mature_66_residues SLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADYAKHCVFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7061; Mature: 6930
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADY CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHH AKHCVFK HHHHCCC >Mature Secondary Structure SLLKTMTAKPTAKLGAIALVLAFTAGLSACAPEVGSDAWCKQMKDKPSGDWTANEAADY CCHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHH AKHCVFK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA