Click here to switch to the map view.

The map label for this gene is 117918944

Identifier: 117918944

GI number: 117918944

Start: 571892

End: 574021

Strand: Direct

Name: 117918944

Synonym: Shewana3_0489

Alternate gene names: NA

Gene position: 571892-574021 (Clockwise)

Preceding gene: 117918939

Following gene: 117918945

Centisome position: 11.5

GC content: 48.31

Gene sequence:

>2130_bases
ATGAAGCGATGGAAATCCAAAGTAGCATTAGGCGTGCTATTTTGTTTAGGTTCTGCCGTAAGCGTTACCACAGTCGCCTC
CGATGCTAAGTCGGAGGGTAAAGTGGTGCCTGGTGTGGGGAATAAGCAGCAATCCCACTATACTCAAGATATTTTGGCTA
ACCCCAATTTAAATGAAAACTTAATGGAAAAATCCCGCGGTGTGAAAACATTGCAGGATTATATTGTTCAAGAGCAAGAA
TTGTTTGATTTTCTATTTGAAAATCACCCAGTTTTTAAATATGACGCAGAAGGTCGATTAAAGGGTACTTATAAAGTCAG
TGACCGTGGTGAAGAATATTTGCACGGTGGTGACAGTGTTGCTTACAGCAAACACAGTAAAGAAGTGAACCCGACGGATG
GCACAGCGGTGCGTTACAGTTCCTACAACGATGGTCAACGTCCAAAGGCGCTGCAATATCGCTTAGGGGCTAAATCTATC
CTCGATTTCCCTAACAAGTTTGTTGGCCCAGAAAAATGCGGTGAGTGTCATGGCCCGCAATACGAGAAGTGGAGACGTTC
ACGCCACTCTAAAACCATTCGTTTCCCTGGCGAGCATCCAGAGGTCGATAACGACCTGAAAAAAACCATGTATGGCACTA
AAGATACTTCGATTCTGCCATCGGGTATTACGCCAGATGCTATCTATGCCACTGTCGGTACACCACGTACCAAGTATGGC
TTTATCGACGCTTATTTAGTGCGCGGTACTTACCACGTTAAAGACGGTCTGTTGAAGGACGGCACAGGGACTATGGTCGC
CGGTGGTAACCAATTCTCCCGTGGTTGGGCTGAGTGGTTAACCCCTGAAATGGCGGCAAAAATCAATAAAGCCATCCCAA
GCTTCCCCGTCAAAATGGAAGACTTCGGTACCAGCGGTTCACACCAATGGGGCATGAGCTCTTACGGTGCTAAGTATGAG
AAGGAATTCCTGTTCCAACCTGCTAGCTCCTATTGTGAAATGTGCCACACCTTTAAGTTTGATTTCCAAACCAAGGATGA
ATTCTTCGCGGCTTTAGGTAACCCGAAAGAGCTGCAAAAGCACACTATCGCCAAAGGGATTACCTGTGAAGAGTGTCACG
GCGCCGGCGGTCACTTAGACGGTGGTATCGGTGGTGGCATGCCATCTAACTGTGAACGTTGTCACCAACGCTTTAACTTT
GTTGAAGAGCTAGCCGAAACGCCACAGGGTAAAGAGAAGCTGGAATATGCCTTCAACGTGAAGATGAAGTCTTCTTGCCC
ATCCTGTGGTACTGAAGGTTCGCAAATGTTTGCCTCTGCGCACTATGACAAAGGTATGCGTTGTTCAACCTGTCACGATC
CGCATGAAGTGACCGATGGCGATTGGACCTCAGGTATCACTAAGCCAAAAATCATCAAACAGTGTACTGACTGTCACACG
GCTCAAGCCGAGATCGCCAAGAACACTAACACCCACAGCAACCAAACCTGTCAAAGCTGTCATATGCCAAACATGGGAAG
TTGTGAAAACTTCACTGCGATCCAATTCCCAGATATGGCGGGCTTCGACAACGTGCGTAAGTCACACATGTGGAAGATTG
ATGTCGACCCACTGCGTAAGACCCTCAACCCACCTGAAGGCAAGTCTCGCGATGCAACCACTAAGGGCTGGACTGTGGCG
AAAGACGAGAACGGCTACAACTACCTCGACCTGATGTGGACTTGTGCCCGCACGTCGGCCTCAGACCACGATGTAGTGGA
TAACAAAGGCTGTCATAGCCAGTTCCAATCTGAGCTGGAAGTCGGTCTGCACTTCGAAGATCAGATGGAAATCTACGGCG
AAGTTCAAAAGTGGCAAAAACCCGTTAAGGATACTTTTGCTCAAGTAGAACAAGCCCTTGCCCGTATCGACAAGCTGTTA
GAAGTCACCAAGCTGTCGGTAGAAGACAAGACTCAAGTGCTGATGTTGACCGACAAAGCCCAAGACGTTGTTCGCCTAAT
CAAGGCTGACGGTTCATGGGGCGTCCATGGTCCACGTTACTCACTGAAACGTCTCGACGCTGCCTTGACCTATGTCACTC
AAGCCCAAGCCATTATCGATGGCAACGGCCTGAGCGCACAGAAAATGTAG

Upstream 100 bases:

>100_bases
GCTGCTTCATCATGCCGCCACTGGTCAATTGTTTATGTCGTTCAGTGAACAGTTAGGTTCAGTGGAAAATATAAAACTAA
TGATAAATTAGGAGTGAATG

Downstream 100 bases:

>100_bases
TTCGACTCGAGTCTAACGTGTCCCCGGCACGCGAGTGTCGGGGGCTATACGAGGCCAAATGATGAATAAAGCGATTCGAC
ACAGCCTGATAGGCGGCTTA

Product: cytochrome c

Products: NA

Alternate protein names: tRNA Synthetase Class II; Cytochrome C Family Protein

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MKRWKSKVALGVLFCLGSAVSVTTVASDAKSEGKVVPGVGNKQQSHYTQDILANPNLNENLMEKSRGVKTLQDYIVQEQE
LFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSVAYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSI
LDFPNKFVGPEKCGECHGPQYEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITPDAIYATVGTPRTKYG
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKMEDFGTSGSHQWGMSSYGAKYE
KEFLFQPASSYCEMCHTFKFDFQTKDEFFAALGNPKELQKHTIAKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNF
VEELAETPQGKEKLEYAFNVKMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTSGITKPKIIKQCTDCHT
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRKTLNPPEGKSRDATTKGWTVA
KDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELEVGLHFEDQMEIYGEVQKWQKPVKDTFAQVEQALARIDKLL
EVTKLSVEDKTQVLMLTDKAQDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM

Sequences:

>Translated_709_residues
MKRWKSKVALGVLFCLGSAVSVTTVASDAKSEGKVVPGVGNKQQSHYTQDILANPNLNENLMEKSRGVKTLQDYIVQEQE
LFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSVAYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSI
LDFPNKFVGPEKCGECHGPQYEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITPDAIYATVGTPRTKYG
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKMEDFGTSGSHQWGMSSYGAKYE
KEFLFQPASSYCEMCHTFKFDFQTKDEFFAALGNPKELQKHTIAKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNF
VEELAETPQGKEKLEYAFNVKMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTSGITKPKIIKQCTDCHT
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRKTLNPPEGKSRDATTKGWTVA
KDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELEVGLHFEDQMEIYGEVQKWQKPVKDTFAQVEQALARIDKLL
EVTKLSVEDKTQVLMLTDKAQDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM
>Mature_709_residues
MKRWKSKVALGVLFCLGSAVSVTTVASDAKSEGKVVPGVGNKQQSHYTQDILANPNLNENLMEKSRGVKTLQDYIVQEQE
LFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSVAYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSI
LDFPNKFVGPEKCGECHGPQYEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITPDAIYATVGTPRTKYG
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKMEDFGTSGSHQWGMSSYGAKYE
KEFLFQPASSYCEMCHTFKFDFQTKDEFFAALGNPKELQKHTIAKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNF
VEELAETPQGKEKLEYAFNVKMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTSGITKPKIIKQCTDCHT
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRKTLNPPEGKSRDATTKGWTVA
KDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELEVGLHFEDQMEIYGEVQKWQKPVKDTFAQVEQALARIDKLL
EVTKLSVEDKTQVLMLTDKAQDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79063; Mature: 79063

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS51008 MULTIHEME_CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRWKSKVALGVLFCLGSAVSVTTVASDAKSEGKVVPGVGNKQQSHYTQDILANPNLNEN
CCHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH
LMEKSRGVKTLQDYIVQEQELFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSV
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHCCCCCE
AYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSILDFPNKFVGPEKCGECHGPQ
EECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHCCHHCCCHHHHCCCCCCC
YEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITPDAIYATVGTPRTKYG
HHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKME
CCEEEEECCEEECCCCCEECCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
DFGTSGSHQWGMSSYGAKYEKEFLFQPASSYCEMCHTFKFDFQTKDEFFAALGNPKELQK
HCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHH
HTIAKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNFVEELAETPQGKEKLEYAFNV
HHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEE
KMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTSGITKPKIIKQCTDCHT
EECCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRK
HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHCEEEEEHHHHHH
TLNPPEGKSRDATTKGWTVAKDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELE
HCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
VGLHFEDQMEIYGEVQKWQKPVKDTFAQVEQALARIDKLLEVTKLSVEDKTQVLMLTDKA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
QDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
>Mature Secondary Structure
MKRWKSKVALGVLFCLGSAVSVTTVASDAKSEGKVVPGVGNKQQSHYTQDILANPNLNEN
CCHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHH
LMEKSRGVKTLQDYIVQEQELFDFLFENHPVFKYDAEGRLKGTYKVSDRGEEYLHGGDSV
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCHHHHCCCCCE
AYSKHSKEVNPTDGTAVRYSSYNDGQRPKALQYRLGAKSILDFPNKFVGPEKCGECHGPQ
EECCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHCCHHHHHHCCHHCCCHHHHCCCCCCC
YEKWRRSRHSKTIRFPGEHPEVDNDLKKTMYGTKDTSILPSGITPDAIYATVGTPRTKYG
HHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
FIDAYLVRGTYHVKDGLLKDGTGTMVAGGNQFSRGWAEWLTPEMAAKINKAIPSFPVKME
CCEEEEECCEEECCCCCEECCCCCEEECCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
DFGTSGSHQWGMSSYGAKYEKEFLFQPASSYCEMCHTFKFDFQTKDEFFAALGNPKELQK
HCCCCCCCCCCCHHHCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHH
HTIAKGITCEECHGAGGHLDGGIGGGMPSNCERCHQRFNFVEELAETPQGKEKLEYAFNV
HHHHCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEE
KMKSSCPSCGTEGSQMFASAHYDKGMRCSTCHDPHEVTDGDWTSGITKPKIIKQCTDCHT
EECCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
AQAEIAKNTNTHSNQTCQSCHMPNMGSCENFTAIQFPDMAGFDNVRKSHMWKIDVDPLRK
HHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHCEEEEEHHHHHH
TLNPPEGKSRDATTKGWTVAKDENGYNYLDLMWTCARTSASDHDVVDNKGCHSQFQSELE
HCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
VGLHFEDQMEIYGEVQKWQKPVKDTFAQVEQALARIDKLLEVTKLSVEDKTQVLMLTDKA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCH
QDVVRLIKADGSWGVHGPRYSLKRLDAALTYVTQAQAIIDGNGLSAQKM
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA