Click here to switch to the map view.

The map label for this gene is yozG [H]

Identifier: 117918939

GI number: 117918939

Start: 567175

End: 567408

Strand: Direct

Name: yozG [H]

Synonym: Shewana3_0484

Alternate gene names: 117918939

Gene position: 567175-567408 (Clockwise)

Preceding gene: 117918938

Following gene: 117918944

Centisome position: 11.41

GC content: 47.44

Gene sequence:

>234_bases
TTGATTTTGAATATTATTGTTAATTTAGACGTCATGATGGCGATGCGAAAGGTGAGTTCTAAGGAGCTGGCCAAAGCGGT
GGGCATTACCGAGGCTAACTTGTCCTTGCTTAAGCGGGGCAAAGTCAAAGGGGTGCGTTTTGATACCTTGGCGAGTATCT
GTGAATACTTAGCCTGTCAGCCGGGGGATATTTTGGAATACCGCAAGGATGCCGAGCAAGACACGTCGGACTAA

Upstream 100 bases:

>100_bases
TGCTCGATTTTGGCAATATCACCACGATTTTATTGATGTTGCTGATCGTGTATTTGCTTAAAGCCGCCCGTGATTACGAG
GCGGAAAACCAAGAGTTTGT

Downstream 100 bases:

>100_bases
GGAAGAGGCCTAGGCTGCATGCTGTGCAGCCTAGGCTTGCGGTTTTACGCTTTTACTAACTGAGTTAAATCCGCAGGGCG
GTAGTAAACTGACTTTAATA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MILNIIVNLDVMMAMRKVSSKELAKAVGITEANLSLLKRGKVKGVRFDTLASICEYLACQPGDILEYRKDAEQDTSD

Sequences:

>Translated_77_residues
MILNIIVNLDVMMAMRKVSSKELAKAVGITEANLSLLKRGKVKGVRFDTLASICEYLACQPGDILEYRKDAEQDTSD
>Mature_77_residues
MILNIIVNLDVMMAMRKVSSKELAKAVGITEANLSLLKRGKVKGVRFDTLASICEYLACQPGDILEYRKDAEQDTSD

Specific function: Unknown

COG id: COG3655

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 8533; Mature: 8533

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNIIVNLDVMMAMRKVSSKELAKAVGITEANLSLLKRGKVKGVRFDTLASICEYLACQ
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PGDILEYRKDAEQDTSD
CCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MILNIIVNLDVMMAMRKVSSKELAKAVGITEANLSLLKRGKVKGVRFDTLASICEYLACQ
CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PGDILEYRKDAEQDTSD
CCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]