BacMap

Definition	Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession	NC_008577
Length	4,972,204

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The map label for this gene is fabG [H]

Identifier: 117918706

GI number: 117918706

Start: 279335

End: 280096

Strand: Direct

Name: fabG [H]

Synonym: Shewana3_0249

Alternate gene names: 117918706

Gene position: 279335-280096 (Clockwise)

Preceding gene: 117918704

Following gene: 117918708

Centisome position: 5.62

GC content: 52.23

Gene sequence:

>762_bases
ATGAACACAGCTCCCATCGCGCTGATCACTGGTGCAAGCCGTGGCTTAGGTAAAAATGCGGCCCTGACCTTAGCCGCACA
AGGTGTTGATATTATTCTAACCTACCAAAGCAATGCCGCTGCAGCCGCCGAGGTGGTTGCGGAAATTGAATGGCATGGAC
GCAAGGCCGTCGCTTTACCGTTAGATGTGGGTGATAGCCAGTCCTTTAGTGATTTTTCGCTGCGCGTAAAAGCCGCACTC
GAACAGACTTGGCTGCGGGATAGTTTTAACTATCTAGTTAATAATGCTGGGATTGGTATCCATGTTCCCATGGCTGAAAC
CAGTGTGGAGCAGTTCGATACTCTGATGAATATCCATGTCAAAGGCCCCTTCTTTTTAACTCAGGCGTTGCTGCCTCTGC
TTGCCGATAATGGCAGTATTATCAATGTCTCTACGGGGTTAACGCGCTTTGCAGTCCCAGGGTTTGGTGCCTACGCCATC
ATGAAAGGCGCGGTCGAAACCATGACCAAATACTGGGCGAAGGAGCTAGGGCCACGCGGGATTCGCGTCAATGTGCTGGC
TCCCGGTGCAATTGAAACGGACTTTGGTGGTGGTGCCGTGCGGGATAATCCAAAAATGAATGAGTTTTTAGCGCAGCAAA
CGGCTTTGGGGCGGGTGGGATTACCCGAGGATATTGGCGGCGCAATCAGTGTCTTGTTGTCACCCGCCGCGGCGTGGATA
AACGCCCAGCGTATCGAGGCTTCTGGCGGTATGTTCTTATAG

Upstream 100 bases:

>100_bases
TTATAGTGTGTTTATCCCTCTTTGTGCAAGTAATAAGCTGTGTAGTGGAATCGCCATGCTGTGCGGCGGCATTAACATAG
ATGAATGAAGAGGATACACA

Downstream 100 bases:

>100_bases
TTCAATGCGATAAAAACAAAGAAAGGGCCCATGGCCCTTTCTTGTTATCAAGGCATAGTTTCAGTTTGGTTAGAAGAACC
CGAGCGGATTGATATCGTAG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNTAPIALITGASRGLGKNAALTLAAQGVDIILTYQSNAAAAAEVVAEIEWHGRKAVALPLDVGDSQSFSDFSLRVKAAL
EQTWLRDSFNYLVNNAGIGIHVPMAETSVEQFDTLMNIHVKGPFFLTQALLPLLADNGSIINVSTGLTRFAVPGFGAYAI
MKGAVETMTKYWAKELGPRGIRVNVLAPGAIETDFGGGAVRDNPKMNEFLAQQTALGRVGLPEDIGGAISVLLSPAAAWI
NAQRIEASGGMFL

Sequences:

>Translated_253_residues
MNTAPIALITGASRGLGKNAALTLAAQGVDIILTYQSNAAAAAEVVAEIEWHGRKAVALPLDVGDSQSFSDFSLRVKAAL
EQTWLRDSFNYLVNNAGIGIHVPMAETSVEQFDTLMNIHVKGPFFLTQALLPLLADNGSIINVSTGLTRFAVPGFGAYAI
MKGAVETMTKYWAKELGPRGIRVNVLAPGAIETDFGGGAVRDNPKMNEFLAQQTALGRVGLPEDIGGAISVLLSPAAAWI
NAQRIEASGGMFL
>Mature_253_residues
MNTAPIALITGASRGLGKNAALTLAAQGVDIILTYQSNAAAAAEVVAEIEWHGRKAVALPLDVGDSQSFSDFSLRVKAAL
EQTWLRDSFNYLVNNAGIGIHVPMAETSVEQFDTLMNIHVKGPFFLTQALLPLLADNGSIINVSTGLTRFAVPGFGAYAI
MKGAVETMTKYWAKELGPRGIRVNVLAPGAIETDFGGGAVRDNPKMNEFLAQQTALGRVGLPEDIGGAISVLLSPAAAWI
NAQRIEASGGMFL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=31.2, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI5031737, Length=248, Percent_Identity=30.241935483871, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI15277342, Length=258, Percent_Identity=28.2945736434109, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=26.6932270916335, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=27.8225806451613, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI33667109, Length=194, Percent_Identity=30.9278350515464, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI20149619, Length=234, Percent_Identity=28.6324786324786, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=26.1538461538462, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI4503817, Length=226, Percent_Identity=26.1061946902655, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI59889578, Length=189, Percent_Identity=32.8042328042328, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI119392083, Length=190, Percent_Identity=32.1052631578947, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI10190704, Length=259, Percent_Identity=27.7992277992278, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI40254992, Length=255, Percent_Identity=26.2745098039216, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI2367175, Length=255, Percent_Identity=33.3333333333333, Blast_Score=108, Evalue=4e-25,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=32.2709163346614, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787335, Length=251, Percent_Identity=32.2709163346614, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787905, Length=254, Percent_Identity=33.0708661417323, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788459, Length=254, Percent_Identity=30.3149606299213, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI2367365, Length=239, Percent_Identity=28.8702928870293, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=29.8387096774194, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790717, Length=250, Percent_Identity=28.4, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI87082100, Length=261, Percent_Identity=30.2681992337165, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI87082160, Length=252, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1786701, Length=216, Percent_Identity=30.5555555555556, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787526, Length=192, Percent_Identity=35.4166666666667, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=237, Percent_Identity=25.3164556962025, Blast_Score=65, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=32.5396825396825, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=30.8, Blast_Score=104, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17560676, Length=256, Percent_Identity=29.6875, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=29.277566539924, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=254, Percent_Identity=28.740157480315, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=267, Percent_Identity=29.9625468164794, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=267, Percent_Identity=30.3370786516854, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=27.8884462151394, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI193204405, Length=267, Percent_Identity=29.9625468164794, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=273, Percent_Identity=28.9377289377289, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=27.5193798449612, Blast_Score=80, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=29.6992481203008, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=265, Percent_Identity=31.3207547169811, Blast_Score=80, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI32563809, Length=191, Percent_Identity=31.413612565445, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17507613, Length=191, Percent_Identity=31.413612565445, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17559104, Length=272, Percent_Identity=27.9411764705882, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17555706, Length=254, Percent_Identity=27.1653543307087, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=273, Percent_Identity=30.7692307692308, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=271, Percent_Identity=28.7822878228782, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI71982365, Length=196, Percent_Identity=32.6530612244898, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=276, Percent_Identity=29.7101449275362, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=265, Percent_Identity=27.5471698113208, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=29.3436293436293, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=265, Percent_Identity=29.4339622641509, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=25.6809338521401, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=28.3524904214559, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=265, Percent_Identity=29.0566037735849, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562990, Length=257, Percent_Identity=28.7937743190661, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17568967, Length=199, Percent_Identity=31.1557788944724, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=250, Percent_Identity=26.4, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24639444, Length=253, Percent_Identity=33.9920948616601, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=33.0612244897959, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21355319, Length=255, Percent_Identity=32.5490196078431, Blast_Score=103, Evalue=1e-22,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=34, Blast_Score=102, Evalue=3e-22,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=33.8645418326693, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=33.0739299610895, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=29.5275590551181, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24644337, Length=167, Percent_Identity=35.9281437125749, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358495, Length=208, Percent_Identity=30.2884615384615, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21357673, Length=207, Percent_Identity=29.951690821256, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26668; Mature: 26668

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAPIALITGASRGLGKNAALTLAAQGVDIILTYQSNAAAAAEVVAEIEWHGRKAVALP
CCCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
LDVGDSQSFSDFSLRVKAALEQTWLRDSFNYLVNNAGIGIHVPMAETSVEQFDTLMNIHV
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHEEEEE
KGPFFLTQALLPLLADNGSIINVSTGLTRFAVPGFGAYAIMKGAVETMTKYWAKELGPRG
CCHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IRVNVLAPGAIETDFGGGAVRDNPKMNEFLAQQTALGRVGLPEDIGGAISVLLSPAAAWI
EEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
NAQRIEASGGMFL
HHEEEECCCCCCC
>Mature Secondary Structure
MNTAPIALITGASRGLGKNAALTLAAQGVDIILTYQSNAAAAAEVVAEIEWHGRKAVALP
CCCCCEEEEECCCCCCCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
LDVGDSQSFSDFSLRVKAALEQTWLRDSFNYLVNNAGIGIHVPMAETSVEQFDTLMNIHV
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHEEEEE
KGPFFLTQALLPLLADNGSIINVSTGLTRFAVPGFGAYAIMKGAVETMTKYWAKELGPRG
CCHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
IRVNVLAPGAIETDFGGGAVRDNPKMNEFLAQQTALGRVGLPEDIGGAISVLLSPAAAWI
EEEEEEECCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
NAQRIEASGGMFL
HHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8759840; 9384377; 9534248; 8654983 [H]