Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918595
Identifier: 117918595
GI number: 117918595
Start: 156299
End: 157129
Strand: Direct
Name: 117918595
Synonym: Shewana3_0137
Alternate gene names: NA
Gene position: 156299-157129 (Clockwise)
Preceding gene: 117918594
Following gene: 117918597
Centisome position: 3.14
GC content: 41.28
Gene sequence:
>831_bases GTGTGGCAGCGGCTAAGCCCGACAAGCGGGTTATGTTTTGCAAACAGCGTAATGCATAAATATAAGACCTTAGACCACAG AACTAAGAGTATCGGAATGCTATCTTTCGAACACGAAAATGGGAGCTATCATCTTCCAGATACAGCTCTTGTTGTTGGTA TCGATGAAACTGGATGCGAGAATTATGCTGATAAGAATTTTCCGGTTTTCGGATTGGGTGGATGCGCTGTACTTGCTAGG GATTATTTCCGGTTTATAGAAGAACCATGGTCAATGATCAAAGACAGTTACTTCTCTGGGAGGAATAAACCGCTTCACGC TGCAGAGCTAAAGAATCCTTCAAAAGATCAATTATCTGCTCTAGAGTCCTTTTTTACGAATTCACCCATCTTCAGATTTG CAACTATGTCTGCAATCAGTTTTGAAAATGGAAGTGGCACTGATAACTTACACCTATTAGTGCAGTCTGTGATGCATCAA GTGTGCGAATTTGCATCGCTAACTAATCCGTCTGAAGTTGTATTTGTAATTGAAGATTCACAAAGAATTGGGAAGGCAAC GCGTAGCTATTTCAGTGCTTATCAAATGAGCTCTGATAATGGGATTATTCCTAGAAAAGTTATGTATGCAACCAAGGATG CATGCTTGTCTCTTCTAGAAGTGGCTGACTTTGTTGTACATCCGGCAGGGGCTCAAGTTAGAAACCGAATCAAAGGTACT TTCCCCAAAAGCGGTCCAATCCGTAAAGATTTCGAAATAGTATTCTATAAAGCAGACCGTAGATTGTGCAGTTATCAGGA AATGCTAATTGCTCAGCCGACTGAGGTCTAA
Upstream 100 bases:
>100_bases AAGCTAAAACGATATCAAGTGAATACGATTTGAGCCGCATAGAAAACAGCTATCCTACAAAAGCAAATTCCGATAGCATC ATTCATACCAATTAACATGA
Downstream 100 bases:
>100_bases GAAAATCACCAATTTGATAGCTTTACTTTGTGCTCTAAGCGGCAAATAAGGCTGCGTTATCAATGGATTTTCCCACTGCT GTAACTTCCTATCTGATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MWQRLSPTSGLCFANSVMHKYKTLDHRTKSIGMLSFEHENGSYHLPDTALVVGIDETGCENYADKNFPVFGLGGCAVLAR DYFRFIEEPWSMIKDSYFSGRNKPLHAAELKNPSKDQLSALESFFTNSPIFRFATMSAISFENGSGTDNLHLLVQSVMHQ VCEFASLTNPSEVVFVIEDSQRIGKATRSYFSAYQMSSDNGIIPRKVMYATKDACLSLLEVADFVVHPAGAQVRNRIKGT FPKSGPIRKDFEIVFYKADRRLCSYQEMLIAQPTEV
Sequences:
>Translated_276_residues MWQRLSPTSGLCFANSVMHKYKTLDHRTKSIGMLSFEHENGSYHLPDTALVVGIDETGCENYADKNFPVFGLGGCAVLAR DYFRFIEEPWSMIKDSYFSGRNKPLHAAELKNPSKDQLSALESFFTNSPIFRFATMSAISFENGSGTDNLHLLVQSVMHQ VCEFASLTNPSEVVFVIEDSQRIGKATRSYFSAYQMSSDNGIIPRKVMYATKDACLSLLEVADFVVHPAGAQVRNRIKGT FPKSGPIRKDFEIVFYKADRRLCSYQEMLIAQPTEV >Mature_276_residues MWQRLSPTSGLCFANSVMHKYKTLDHRTKSIGMLSFEHENGSYHLPDTALVVGIDETGCENYADKNFPVFGLGGCAVLAR DYFRFIEEPWSMIKDSYFSGRNKPLHAAELKNPSKDQLSALESFFTNSPIFRFATMSAISFENGSGTDNLHLLVQSVMHQ VCEFASLTNPSEVVFVIEDSQRIGKATRSYFSAYQMSSDNGIIPRKVMYATKDACLSLLEVADFVVHPAGAQVRNRIKGT FPKSGPIRKDFEIVFYKADRRLCSYQEMLIAQPTEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31032; Mature: 31032
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQRLSPTSGLCFANSVMHKYKTLDHRTKSIGMLSFEHENGSYHLPDTALVVGIDETGCE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCEEEEECCCCCCC NYADKNFPVFGLGGCAVLARDYFRFIEEPWSMIKDSYFSGRNKPLHAAELKNPSKDQLSA CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH LESFFTNSPIFRFATMSAISFENGSGTDNLHLLVQSVMHQVCEFASLTNPSEVVFVIEDS HHHHHCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC QRIGKATRSYFSAYQMSSDNGIIPRKVMYATKDACLSLLEVADFVVHPAGAQVRNRIKGT HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC FPKSGPIRKDFEIVFYKADRRLCSYQEMLIAQPTEV CCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC >Mature Secondary Structure MWQRLSPTSGLCFANSVMHKYKTLDHRTKSIGMLSFEHENGSYHLPDTALVVGIDETGCE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCEECCCCEEEEECCCCCCC NYADKNFPVFGLGGCAVLARDYFRFIEEPWSMIKDSYFSGRNKPLHAAELKNPSKDQLSA CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHHHH LESFFTNSPIFRFATMSAISFENGSGTDNLHLLVQSVMHQVCEFASLTNPSEVVFVIEDS HHHHHCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC QRIGKATRSYFSAYQMSSDNGIIPRKVMYATKDACLSLLEVADFVVHPAGAQVRNRIKGT HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC FPKSGPIRKDFEIVFYKADRRLCSYQEMLIAQPTEV CCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA