Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
---|---|
Accession | NC_008577 |
Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117918584
Identifier: 117918584
GI number: 117918584
Start: 142852
End: 143262
Strand: Direct
Name: 117918584
Synonym: Shewana3_0126
Alternate gene names: NA
Gene position: 142852-143262 (Clockwise)
Preceding gene: 117918582
Following gene: 117918585
Centisome position: 2.87
GC content: 46.96
Gene sequence:
>411_bases ATGAAAAAATTATTATCAGCCTGCCTGATCTTATTCAGTGTTGTATTGAGTGCATATGCGGCCGACGAGAAAGAAGCGAC TCCCGCTGGGGATTATGCTTACTACGGTTTCGAACCCGAAATCGTGACTAACTATATTTCAAACCGCAAAAAACTGGGGT TTGTGAAGATCAGTGTCGAGCTGATGGTCAAAAATCCCGATGATCTCGTCATTGTCGAGCGCCACGATCCGCTGCTGCGC GCCGCGATTATCGAAGTGCTTGGTAATCAGGCCGAAGAAAAGATTAAGTCCCTCACTGGCCGTGAAGAAATCCGCCGTGA GTGCTTCGATACGGTGAATAATCTGCTGACCAAAGAAGCGGGTAAGCCCTTAGTGGTCAACCTACTGTTTACCTCCTATC TTTACGATTAA
Upstream 100 bases:
>100_bases AAATACTCGTTACAATATAAGCAAACGTCGGCAGTCTACCAGATAGATTGGGAAGTTTCTTCCATTGACCATTATTGTTT TTAGGGAGCAGTAAACCGCG
Downstream 100 bases:
>100_bases TTCCGCCAATATGTTTGAGGGCTGATCCTTGGATTAGCCCGCCCTTGTTGATAAGTCATTATGCCTAAACCCGCCATTAA AACTGCCGCTAAACTCGCGA
Product: flagellar basal body-associated protein FliL-like protein
Products: NA
Alternate protein names: Flagellar Basal Body-Associated Protein FliL; Flagellar Protein FliL; Flagellar Biosynthesis Protein FliL
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKKLLSACLILFSVVLSAYAADEKEATPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKNPDDLVIVERHDPLLR AAIIEVLGNQAEEKIKSLTGREEIRRECFDTVNNLLTKEAGKPLVVNLLFTSYLYD
Sequences:
>Translated_136_residues MKKLLSACLILFSVVLSAYAADEKEATPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKNPDDLVIVERHDPLLR AAIIEVLGNQAEEKIKSLTGREEIRRECFDTVNNLLTKEAGKPLVVNLLFTSYLYD >Mature_136_residues MKKLLSACLILFSVVLSAYAADEKEATPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVELMVKNPDDLVIVERHDPLLR AAIIEVLGNQAEEKIKSLTGREEIRRECFDTVNNLLTKEAGKPLVVNLLFTSYLYD
Specific function: Unknown
COG id: COG1580
COG function: function code N; Flagellar basal body-associated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15331; Mature: 15331
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLSACLILFSVVLSAYAADEKEATPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEEE LMVKNPDDLVIVERHDPLLRAAIIEVLGNQAEEKIKSLTGREEIRRECFDTVNNLLTKEA EEEECCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GKPLVVNLLFTSYLYD CCCHHHHHHHHHHHCC >Mature Secondary Structure MKKLLSACLILFSVVLSAYAADEKEATPAGDYAYYGFEPEIVTNYISNRKKLGFVKISVE CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCEEEEEEEE LMVKNPDDLVIVERHDPLLRAAIIEVLGNQAEEKIKSLTGREEIRRECFDTVNNLLTKEA EEEECCCCEEEEECCCHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCC GKPLVVNLLFTSYLYD CCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA