| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is ina [H]
Identifier: 117918582
GI number: 117918582
Start: 139551
End: 142121
Strand: Direct
Name: ina [H]
Synonym: Shewana3_0124
Alternate gene names: 117918582
Gene position: 139551-142121 (Clockwise)
Preceding gene: 117918581
Following gene: 117918584
Centisome position: 2.81
GC content: 49.32
Gene sequence:
>2571_bases ATGCGAAGTTCAAGAAGTATCACAGCGTTAGGATTGATGTTGGCCTTGCTGAGTGGCGCAAGTATTGCGGCGCCTAATCA TACGCCAGCGGATGCAGGGGTCATTAATAAAGAAAGGATCCTCTATTGGTTGATCAAGCGGGGCGAAGTCTCCGCTGATG CTAGCGACAGCGTTAAGCAAGAGGCCGTTGAAGCCTATATTGCCCGTGCCAACCTAGCCCAGCCCAAAGAGCCTAGAATG GTGATTGAGGCCGAGCAGGACAGGCTGCAAAAAGCCAAGTCGACGGCGATGATGCGCGCCCCCGCACAGCGGGTGTTAGC GGATGCAGACGTGACTAAAACGGTGAAGGTATTAACCGTTCTAATTGATTTTCCTGATTTAAAGTATAACAACAATGGTT TAACGGCGAGTGATACCGACATGTATTACTCCAGTTACCCCGCTTCTCACTATAAAAATTTACTCTTCTCCACCACAGGT TTTAATGGTCCTCAAGGGCAGACCTTAGATTCGGCCTATCAATATTACCAAGCTGTTTCGGGCAAGACTTTCTTCTTCAC GGGCGATGTGAAAGGTTGGTACACCGCGAGCCAAAATGCCGATTACTATGGCGCGAATAATGCTGGCAGGGGAAGCGATG CAAATGTGACTGAGCTGGTTAAAGAGGCGGTCAGCCAAGCGGTTGCCAATATGTCGGAGGCGGAACTCGCCACCTATGAT GTTGAAGACCCATACGATTTTAATGATAACGGCAATCTAAATGAGCCTGATGGCATAATTGACCATGTGATGATTTTCCA CTCGAGTATTGGGGAAGAAACCGGGGGCGGTAAATTAGGGGATAACGCGATTTGGTCGCATCGCTATTACGTTGACCAAA GCACGCAAGGTTATAGCCTGCCGGGGACGACTAAAAAACTCTTTGGTTACACTATTCAACCAATCGATGCGGCAACCGGA GTATGTACCCATGAGTTTGGCCACGATCTGGGTTTGCCCGATGAGTATGACACTACAGAAAACGATAACCAAGACGGCTC ACCAGTGGGTTATTGGTCTTTAATGTCTTCGGGTAGCTGGACCGGCGCTCTTGCGGGAACTAAGCCTAGCGGTTTTAGCC CCTATGCACGCTCCTATTTACAGACAAAATATAAAGGTAAATGGCTGAATGAGCGTGAAATCAACTTAGACAGTATTCCT AGATCTGGTATGGAAGTGACACTGAATCAGGCGTCAAATCAAGACCTAGTGAATCAGGTGTCGATTCCTCTCCCTGCTGC TCCGATTGCCTTTAAAACGCCCTATCAAGGGAGTTACCAGTACTATTCGGGCCAAGGAAATATGCTGAGCAACAGCATGA ACTTTACGGCAAACTTGCCGGCGACGAGTGAAAAACTCACTCTTGCGATGCAGGCGAGTTGGGAAATTGAAGCCGATTAC GACTATATGCAGGTCAAAGTTGACGGTGTGGCGATTGCGGGTAATTACACTAAGTCCGTCAACGCGATTAACCGTGCCCG ACATATTATTACGGGTAACTCATCGAGTATTTCGACCGCAGTAGGCAGTGATGCTTGGGTGGGGTTGGAATATGACTTAT CAGCCTACGCTGGCAAAGCTGTGACGATTGAATTTTCCTATGTGACCGATGAGGCGACAACCGAGTCGGGTATCACTATC GACAATATCAGCATCAAGCAAGGTGCAACTGAGTTGTATGCCGATAATGCCGAGGTTGCGGGTAAAGCCACTCTGGCAGG TTACAATCGTATTACCGACACTCGCCCAGGCCCTGCATCCCGTTATCTTATCCAGTTACGCAGCCATAATGGTGTCGATG CTGGATTAAAGAGTAAAGGTTTTGATCCCGGAGTACTCCTGTGGTTAGAGGATTTTAGTTACTACGATAACAATGTGTCT GATCATCCTGGCCACGGTTTGATTGGGGTGATAGATGCGGATCAGAACATGATTGGCAACAACTCGACCGATGTGCAAAT CCGTGATGCAGCCTTTAGTACGGTAAGACAAACTGCTTACAGCGGCGATAATAACCTCGAGCCTGTGAGCCTGTTTGACG ATAGTTTCGATTACAGTGCACCGCTACAACCTCAATCGGGTATGGTGTTGCAAAAACTGGGCTTGACGATGCAAGTGGTC TCTCAAGCCAGCGATAACAGCACAGCGGTGATCCGTTTAGCTAATGCGAATGCTGATCCAGCGTTAACTCCCTTAACCGC TGGTTTTAGTGCCAGTGCCAACCAGCTCACGGTGAACTTTAGCAACACCTCGGCAGGTGGCGTTGGTAGCCTAAGTTATA CATGGAACTTTGGCGATGGCACCTCAAGCACTTCGGCATCGCCAACCCACACTTACACTAGCGAGGGCACTTACACTGTC ACACTGACGGTGAAAGATACTCAAAACGCTACCGCGAGCAGCAGTTCAAGCGTTACCGTGACAGCACCAACGACGCCTGC TGAAACATCGAGTGGCGGCGGTGGTGGCAGTCTAGGTTGGCTGAGTCTGATGCTGCTCGGTGGCTTTGCGTGGCGCCGTC AGCACAAATAA
Upstream 100 bases:
>100_bases AGATCGCGAGCCGCCAAAAACAAACTTGCCATAGAGCAAATAGGCACTAGCCTTAGAAAATAGCTTGGCTACAGCGCACA TTGTGACGGAAGGAAGAGTA
Downstream 100 bases:
>100_bases GCGGATATGTTTACGAAAAATGCCTCTGATATAGAGGCATTTTTGTTTTAGCTTAGAGGTTAGGACTATAGCCTAGCCAT CGCTTGCACTGCGGCCGGGA
Product: peptidase M6, immune inhibitor A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 856; Mature: 856
Protein sequence:
>856_residues MRSSRSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQEAVEAYIARANLAQPKEPRM VIEAEQDRLQKAKSTAMMRAPAQRVLADADVTKTVKVLTVLIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTG FNGPQGQTLDSAYQYYQAVSGKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSEAELATYD VEDPYDFNDNGNLNEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSLPGTTKKLFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENDNQDGSPVGYWSLMSSGSWTGALAGTKPSGFSPYARSYLQTKYKGKWLNEREINLDSIP RSGMEVTLNQASNQDLVNQVSIPLPAAPIAFKTPYQGSYQYYSGQGNMLSNSMNFTANLPATSEKLTLAMQASWEIEADY DYMQVKVDGVAIAGNYTKSVNAINRARHIITGNSSSISTAVGSDAWVGLEYDLSAYAGKAVTIEFSYVTDEATTESGITI DNISIKQGATELYADNAEVAGKATLAGYNRITDTRPGPASRYLIQLRSHNGVDAGLKSKGFDPGVLLWLEDFSYYDNNVS DHPGHGLIGVIDADQNMIGNNSTDVQIRDAAFSTVRQTAYSGDNNLEPVSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV SQASDNSTAVIRLANANADPALTPLTAGFSASANQLTVNFSNTSAGGVGSLSYTWNFGDGTSSTSASPTHTYTSEGTYTV TLTVKDTQNATASSSSSVTVTAPTTPAETSSGGGGGSLGWLSLMLLGGFAWRRQHK
Sequences:
>Translated_856_residues MRSSRSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQEAVEAYIARANLAQPKEPRM VIEAEQDRLQKAKSTAMMRAPAQRVLADADVTKTVKVLTVLIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTG FNGPQGQTLDSAYQYYQAVSGKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSEAELATYD VEDPYDFNDNGNLNEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSLPGTTKKLFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENDNQDGSPVGYWSLMSSGSWTGALAGTKPSGFSPYARSYLQTKYKGKWLNEREINLDSIP RSGMEVTLNQASNQDLVNQVSIPLPAAPIAFKTPYQGSYQYYSGQGNMLSNSMNFTANLPATSEKLTLAMQASWEIEADY DYMQVKVDGVAIAGNYTKSVNAINRARHIITGNSSSISTAVGSDAWVGLEYDLSAYAGKAVTIEFSYVTDEATTESGITI DNISIKQGATELYADNAEVAGKATLAGYNRITDTRPGPASRYLIQLRSHNGVDAGLKSKGFDPGVLLWLEDFSYYDNNVS DHPGHGLIGVIDADQNMIGNNSTDVQIRDAAFSTVRQTAYSGDNNLEPVSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV SQASDNSTAVIRLANANADPALTPLTAGFSASANQLTVNFSNTSAGGVGSLSYTWNFGDGTSSTSASPTHTYTSEGTYTV TLTVKDTQNATASSSSSVTVTAPTTPAETSSGGGGGSLGWLSLMLLGGFAWRRQHK >Mature_856_residues MRSSRSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQEAVEAYIARANLAQPKEPRM VIEAEQDRLQKAKSTAMMRAPAQRVLADADVTKTVKVLTVLIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTG FNGPQGQTLDSAYQYYQAVSGKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSEAELATYD VEDPYDFNDNGNLNEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSLPGTTKKLFGYTIQPIDAATG VCTHEFGHDLGLPDEYDTTENDNQDGSPVGYWSLMSSGSWTGALAGTKPSGFSPYARSYLQTKYKGKWLNEREINLDSIP RSGMEVTLNQASNQDLVNQVSIPLPAAPIAFKTPYQGSYQYYSGQGNMLSNSMNFTANLPATSEKLTLAMQASWEIEADY DYMQVKVDGVAIAGNYTKSVNAINRARHIITGNSSSISTAVGSDAWVGLEYDLSAYAGKAVTIEFSYVTDEATTESGITI DNISIKQGATELYADNAEVAGKATLAGYNRITDTRPGPASRYLIQLRSHNGVDAGLKSKGFDPGVLLWLEDFSYYDNNVS DHPGHGLIGVIDADQNMIGNNSTDVQIRDAAFSTVRQTAYSGDNNLEPVSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV SQASDNSTAVIRLANANADPALTPLTAGFSASANQLTVNFSNTSAGGVGSLSYTWNFGDGTSSTSASPTHTYTSEGTYTV TLTVKDTQNATASSSSSVTVTAPTTPAETSSGGGGGSLGWLSLMLLGGFAWRRQHK
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 91828; Mature: 91828
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: PS50093 PKD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSRSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQ CCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH EAVEAYIARANLAQPKEPRMVIEAEQDRLQKAKSTAMMRAPAQRVLADADVTKTVKVLTV HHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHEEEEEE LIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTGFNGPQGQTLDSAYQYYQAVS EEECCCCEECCCCCCCCCCCCEECCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHC GKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSEAELATYD CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEE VEDPYDFNDNGNLNEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC PGTTKKLFGYTIQPIDAATGVCTHEFGHDLGLPDEYDTTENDNQDGSPVGYWSLMSSGSW CCCCHHHCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC TGALAGTKPSGFSPYARSYLQTKYKGKWLNEREINLDSIPRSGMEVTLNQASNQDLVNQV CEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCCCCHHHHHC SIPLPAAPIAFKTPYQGSYQYYSGQGNMLSNSMNFTANLPATSEKLTLAMQASWEIEADY CCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCEEEECCCCCCEEEEEEEECEEEECCC DYMQVKVDGVAIAGNYTKSVNAINRARHIITGNSSSISTAVGSDAWVGLEYDLSAYAGKA CEEEEEECCEEEECCCHHHHHHHHHCEEEEECCCCCCEEECCCCEEEEEEECHHHHCCCE VTIEFSYVTDEATTESGITIDNISIKQGATELYADNAEVAGKATLAGYNRITDTRPGPAS EEEEEEEEECCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCC RYLIQLRSHNGVDAGLKSKGFDPGVLLWLEDFSYYDNNVSDHPGHGLIGVIDADQNMIGN EEEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCC NSTDVQIRDAAFSTVRQTAYSGDNNLEPVSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV CCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHH SQASDNSTAVIRLANANADPALTPLTAGFSASANQLTVNFSNTSAGGVGSLSYTWNFGDG HCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCC TSSTSASPTHTYTSEGTYTVTLTVKDTQNATASSSSSVTVTAPTTPAETSSGGGGGSLGW CCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHH LSLMLLGGFAWRRQHK HHHHHHHHHHHHHCCC >Mature Secondary Structure MRSSRSITALGLMLALLSGASIAAPNHTPADAGVINKERILYWLIKRGEVSADASDSVKQ CCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHH EAVEAYIARANLAQPKEPRMVIEAEQDRLQKAKSTAMMRAPAQRVLADADVTKTVKVLTV HHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCHHHHHHCCCHHHHEEEEEE LIDFPDLKYNNNGLTASDTDMYYSSYPASHYKNLLFSTTGFNGPQGQTLDSAYQYYQAVS EEECCCCEECCCCCCCCCCCCEECCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHC GKTFFFTGDVKGWYTASQNADYYGANNAGRGSDANVTELVKEAVSQAVANMSEAELATYD CCEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEE VEDPYDFNDNGNLNEPDGIIDHVMIFHSSIGEETGGGKLGDNAIWSHRYYVDQSTQGYSL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCC PGTTKKLFGYTIQPIDAATGVCTHEFGHDLGLPDEYDTTENDNQDGSPVGYWSLMSSGSW CCCCHHHCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC TGALAGTKPSGFSPYARSYLQTKYKGKWLNEREINLDSIPRSGMEVTLNQASNQDLVNQV CEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEEEECCCCCHHHHHC SIPLPAAPIAFKTPYQGSYQYYSGQGNMLSNSMNFTANLPATSEKLTLAMQASWEIEADY CCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCEEEECCCCCCEEEEEEEECEEEECCC DYMQVKVDGVAIAGNYTKSVNAINRARHIITGNSSSISTAVGSDAWVGLEYDLSAYAGKA CEEEEEECCEEEECCCHHHHHHHHHCEEEEECCCCCCEEECCCCEEEEEEECHHHHCCCE VTIEFSYVTDEATTESGITIDNISIKQGATELYADNAEVAGKATLAGYNRITDTRPGPAS EEEEEEEEECCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCEEEECCCCCCCCCCCCCCC RYLIQLRSHNGVDAGLKSKGFDPGVLLWLEDFSYYDNNVSDHPGHGLIGVIDADQNMIGN EEEEEEECCCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCCCCEEEEEECCCCCCCC NSTDVQIRDAAFSTVRQTAYSGDNNLEPVSLFDDSFDYSAPLQPQSGMVLQKLGLTMQVV CCCCEEEEHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHCCHHHHH SQASDNSTAVIRLANANADPALTPLTAGFSASANQLTVNFSNTSAGGVGSLSYTWNFGDG HCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCC TSSTSASPTHTYTSEGTYTVTLTVKDTQNATASSSSSVTVTAPTTPAETSSGGGGGSLGW CCCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHH LSLMLLGGFAWRRQHK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]