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The map label for this gene is viuB [H]

Identifier: 117918556

GI number: 117918556

Start: 108012

End: 108758

Strand: Direct

Name: viuB [H]

Synonym: Shewana3_0097

Alternate gene names: 117918556

Gene position: 108012-108758 (Clockwise)

Preceding gene: 117918555

Following gene: 117918558

Centisome position: 2.17

GC content: 49.67

Gene sequence:

>747_bases
ATGAACAGACCCGCCCCGCGCGAATTGACCGTGATAGGTAAAACCCAAGTCACGCCACATATGCTGCGTATCACTTTAGG
TGGCGATGGCTTTGCAGGTTTTCCCGCCGATCAAGAAAGCGCCTATATCAAATTACTGTTTCCGCAGCCGGGGGATGAGC
GGCCATTAATGCGCACTTATACCATTCGTCAGCAGCGGATGAATGAAATCGATGTGGATTTTGTGCTGCACGATACCGAT
GGCCCCGCATCCCGTTGGGCAAAGTCGACCGAGATTGGGGATAGCATCCAAATCGGTGGCCCAGGACTGAAAAAATTGAT
CAACTTAGACGCAGAATGGTTTTTACTGGCAGGGGATATGACGGCCTTGCCCGCCATCAGTGTGAACTTGGCGCAATTGC
CAAGCAATGCAGTGGGTTACACTGTGATTGAGGTGCTAAGTGAAGCCGATATTCAGCCCTTAGTGCATCCTAGCAATGTG
CAATTGCATTGGGTGATTAATCCAGAGGCCGACCCAGAAGGTAAGCCCTTGGCCGAACGCATTGCTCAGTTGCCAAAACT
CGAGGGGCAAGGCGCCGTATGGCTCGCCTGCGAATTTAGCAGTATGCGCGCCCTAAGAAAGCTGCTTAAGCAGACATACG
ACTTACCGAAAAGCCATTTTTATACATCAAGTTACTGGAAAATCGGCTGTAATGAAGGCGAGCATAAGTTGGTAAAACAA
CAAGATGAGCAGTTAGAAAACCAATAA

Upstream 100 bases:

>100_bases
AGGATGAAATTGCGGTGTTTATCCGTATTGCCAACCAGATCAGCGATAGTGTGGCGGAAAGCTAACCATTGAGTGCCATT
TATCTTTTTGGAGTTTAAGT

Downstream 100 bases:

>100_bases
ACCCTGTTAGGATTAGCTGACAAAAATTAAAATGCACAGTACATTTTTTGCAGGCGTATTGTAGCCTGCTTTAGCCATTT
GCACCTGTAACATTCATCAA

Product: FAD-binding 9, siderophore-interacting domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNRPAPRELTVIGKTQVTPHMLRITLGGDGFAGFPADQESAYIKLLFPQPGDERPLMRTYTIRQQRMNEIDVDFVLHDTD
GPASRWAKSTEIGDSIQIGGPGLKKLINLDAEWFLLAGDMTALPAISVNLAQLPSNAVGYTVIEVLSEADIQPLVHPSNV
QLHWVINPEADPEGKPLAERIAQLPKLEGQGAVWLACEFSSMRALRKLLKQTYDLPKSHFYTSSYWKIGCNEGEHKLVKQ
QDEQLENQ

Sequences:

>Translated_248_residues
MNRPAPRELTVIGKTQVTPHMLRITLGGDGFAGFPADQESAYIKLLFPQPGDERPLMRTYTIRQQRMNEIDVDFVLHDTD
GPASRWAKSTEIGDSIQIGGPGLKKLINLDAEWFLLAGDMTALPAISVNLAQLPSNAVGYTVIEVLSEADIQPLVHPSNV
QLHWVINPEADPEGKPLAERIAQLPKLEGQGAVWLACEFSSMRALRKLLKQTYDLPKSHFYTSSYWKIGCNEGEHKLVKQ
QDEQLENQ
>Mature_248_residues
MNRPAPRELTVIGKTQVTPHMLRITLGGDGFAGFPADQESAYIKLLFPQPGDERPLMRTYTIRQQRMNEIDVDFVLHDTD
GPASRWAKSTEIGDSIQIGGPGLKKLINLDAEWFLLAGDMTALPAISVNLAQLPSNAVGYTVIEVLSEADIQPLVHPSNV
QLHWVINPEADPEGKPLAERIAQLPKLEGQGAVWLACEFSSMRALRKLLKQTYDLPKSHFYTSSYWKIGCNEGEHKLVKQ
QDEQLENQ

Specific function: Involved in intracellular removal of iron from iron- vulnibactin complex. Vulnibactin is a iron-chelating compound involved in transporting iron from the bacterial environment into the cell cytoplasm [H]

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqjH [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=242, Percent_Identity=26.4462809917355, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 27668; Mature: 27668

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRPAPRELTVIGKTQVTPHMLRITLGGDGFAGFPADQESAYIKLLFPQPGDERPLMRTY
CCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH
TIRQQRMNEIDVDFVLHDTDGPASRWAKSTEIGDSIQIGGPGLKKLINLDAEWFLLAGDM
HHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEECCHHHHHHHCCCCCEEEEECCC
TALPAISVNLAQLPSNAVGYTVIEVLSEADIQPLVHPSNVQLHWVINPEADPEGKPLAER
CCCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH
IAQLPKLEGQGAVWLACEFSSMRALRKLLKQTYDLPKSHFYTSSYWKIGCNEGEHKLVKQ
HHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHEECCCEEEEECCCCHHHHHHH
QDEQLENQ
HHHHHCCC
>Mature Secondary Structure
MNRPAPRELTVIGKTQVTPHMLRITLGGDGFAGFPADQESAYIKLLFPQPGDERPLMRTY
CCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHH
TIRQQRMNEIDVDFVLHDTDGPASRWAKSTEIGDSIQIGGPGLKKLINLDAEWFLLAGDM
HHHHHHCCCCCEEEEEECCCCCHHHHHCCCCCCCEEEECCHHHHHHHCCCCCEEEEECCC
TALPAISVNLAQLPSNAVGYTVIEVLSEADIQPLVHPSNVQLHWVINPEADPEGKPLAER
CCCCEEEEEHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHH
IAQLPKLEGQGAVWLACEFSSMRALRKLLKQTYDLPKSHFYTSSYWKIGCNEGEHKLVKQ
HHHCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHEECCCEEEEECCCCHHHHHHH
QDEQLENQ
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8698519 [H]