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The map label for this gene is 117918555

Identifier: 117918555

GI number: 117918555

Start: 107548

End: 107976

Strand: Direct

Name: 117918555

Synonym: Shewana3_0096

Alternate gene names: NA

Gene position: 107548-107976 (Clockwise)

Preceding gene: 117918553

Following gene: 117918556

Centisome position: 2.16

GC content: 50.58

Gene sequence:

>429_bases
ATGTCTGCTATTTCCCTCGGTGAAACCTTGCACAGATTAGTGCATGCCTACAAAAAACAGCTGCGTGCGGATATTGCTGC
GCAGCAGATTGAATTACCTGTCACCCATATTCGGGCGCTCAAGGGGATTTGCCGTCATCCCGAGGCCACGGCGCAATCTA
TTGCCCTACGCATGCAACGGGATAAAGCTCAAATTACGCGGGTGCTCAATGAGCTACAGCAGGCTGGTTATATCCTAAAA
GTCGATAATCCTAAGGATGGCCGTAGCCAGTTATTGAGACCGACGGCGCAGGGTGAGCAGTTGATGACGCAAATTATTGC
CGCCGAAAAAGCCACCGTTGCCCATATGACCCAAGCACTCGATCAGGATGAAATTGCGGTGTTTATCCGTATTGCCAACC
AGATCAGCGATAGTGTGGCGGAAAGCTAA

Upstream 100 bases:

>100_bases
AATTTTTGGGCTTAGCCAGTAATTCGCCAACTGCTATTTAGTTGACATAGTCAATCAATCTCGATATTGTTGATAATGTC
AACTATCTCGAGATGTCATT

Downstream 100 bases:

>100_bases
CCATTGAGTGCCATTTATCTTTTTGGAGTTTAAGTATGAACAGACCCGCCCCGCGCGAATTGACCGTGATAGGTAAAACC
CAAGTCACGCCACATATGCT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcription Regulator; Transcriptional Regulator; Transcriptional Regulator MarR Family Protein

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MSAISLGETLHRLVHAYKKQLRADIAAQQIELPVTHIRALKGICRHPEATAQSIALRMQRDKAQITRVLNELQQAGYILK
VDNPKDGRSQLLRPTAQGEQLMTQIIAAEKATVAHMTQALDQDEIAVFIRIANQISDSVAES

Sequences:

>Translated_142_residues
MSAISLGETLHRLVHAYKKQLRADIAAQQIELPVTHIRALKGICRHPEATAQSIALRMQRDKAQITRVLNELQQAGYILK
VDNPKDGRSQLLRPTAQGEQLMTQIIAAEKATVAHMTQALDQDEIAVFIRIANQISDSVAES
>Mature_141_residues
SAISLGETLHRLVHAYKKQLRADIAAQQIELPVTHIRALKGICRHPEATAQSIALRMQRDKAQITRVLNELQQAGYILKV
DNPKDGRSQLLRPTAQGEQLMTQIIAAEKATVAHMTQALDQDEIAVFIRIANQISDSVAES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15743; Mature: 15612

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAISLGETLHRLVHAYKKQLRADIAAQQIELPVTHIRALKGICRHPEATAQSIALRMQR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DKAQITRVLNELQQAGYILKVDNPKDGRSQLLRPTAQGEQLMTQIIAAEKATVAHMTQAL
HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
DQDEIAVFIRIANQISDSVAES
CHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAISLGETLHRLVHAYKKQLRADIAAQQIELPVTHIRALKGICRHPEATAQSIALRMQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
DKAQITRVLNELQQAGYILKVDNPKDGRSQLLRPTAQGEQLMTQIIAAEKATVAHMTQAL
HHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHC
DQDEIAVFIRIANQISDSVAES
CHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA