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The map label for this gene is ycaK [C]

Identifier: 117918546

GI number: 117918546

Start: 99482

End: 100060

Strand: Direct

Name: ycaK [C]

Synonym: Shewana3_0087

Alternate gene names: 117918546

Gene position: 99482-100060 (Clockwise)

Preceding gene: 117918545

Following gene: 117918547

Centisome position: 2.0

GC content: 50.6

Gene sequence:

>579_bases
ATGACAAAAAAGATTCTGGTTGTTTCTGGCCATCCCAAACCCGATAGCCTGTGTGAACATTTAGCCGACACTTACGCCAA
GGCTGCGGGCGAGTCGCATTCGGTGCGTCTGTTAAAGCTCTGCGAGTTGGAATTTGAGCCTAATTTGGCGCACGGATACC
ATCAAGAACAGCCATTAGAGGCGGATTTGCAAAGCTTTCAGCAGGCTATTCTCTGGGCCGAGCATCTAGTGATTGTGGTG
CCCATTTGGTGGGGCAGCGTACCCGCCAAGTTTAAAGGATTAATTGATCGAACATTTTTACCCGGTTTTGCTTTTCAGTA
TCAGCAGGGGAAAACCTTTCCCAATCGGCTGCTCGAGGGGAGAACCTCACGCATTATCATGACCATGGATACGCCGCCTT
GGTATTACAAGTGGTTCCAGGGCGCGCCCGCCCTAAAGCAATTAGATATCGCGACCTTAGCCTTTAGTGGTTTTAAGCGC
ACCAAGAGTCAAATGTTGGGGCCAGTGATCAATGCCAAGGCGCAGCAAGTGCAAAACTGGCAAGCGCAAGTTGAACGGCA
TGGCAGGTTGGGGCGTTAA

Upstream 100 bases:

>100_bases
GTTTGGATACCTGCGAATCCCGCGCCTAATTCCAAGCTTGACTCTGCCCCTAGGGGCAGAGCTTAAGCTGTTGTCATATT
GAATACTCAAGGTTTTTACT

Downstream 100 bases:

>100_bases
TCAAAAGGAGCTTAAGTGATTAAACAAGTTGGCAATACTCATATCCAAGCAAAGCATCTCGCCAGTTGCCACTGTGGCGC
CGTGGTGTTGGAGTTATCGC

Product: NAD(P)H dehydrogenase (quinone)

Products: NA

Alternate protein names: NAD(P)H Dehydrogenase Quinone Family; Oxidoreductase; NADPH-Quinone Reductase; Quinone Family NAD(P)H Dehydrogenase; Flavodoxin-Like Fold Subfamily; NADPH-Dependent FMN Reductase; Flavodoxin-Like Fold Protein; NAD(P)H Dehydrogenase Protein; Quinone Family Oxidoreductase/NAD(P)H Dehydrogenase; Ribosyldihydronicotinamide Dehydrogenase; Flavodoxin Containing Oxidoreductase; NAD(P)H Quinone Oxidoreductase; NAD(P)H Oxidoreductase; Flavodoxin-Like Fold Domain Protein; NADPH-Quinone Reductase YabF Family

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTKKILVVSGHPKPDSLCEHLADTYAKAAGESHSVRLLKLCELEFEPNLAHGYHQEQPLEADLQSFQQAILWAEHLVIVV
PIWWGSVPAKFKGLIDRTFLPGFAFQYQQGKTFPNRLLEGRTSRIIMTMDTPPWYYKWFQGAPALKQLDIATLAFSGFKR
TKSQMLGPVINAKAQQVQNWQAQVERHGRLGR

Sequences:

>Translated_192_residues
MTKKILVVSGHPKPDSLCEHLADTYAKAAGESHSVRLLKLCELEFEPNLAHGYHQEQPLEADLQSFQQAILWAEHLVIVV
PIWWGSVPAKFKGLIDRTFLPGFAFQYQQGKTFPNRLLEGRTSRIIMTMDTPPWYYKWFQGAPALKQLDIATLAFSGFKR
TKSQMLGPVINAKAQQVQNWQAQVERHGRLGR
>Mature_191_residues
TKKILVVSGHPKPDSLCEHLADTYAKAAGESHSVRLLKLCELEFEPNLAHGYHQEQPLEADLQSFQQAILWAEHLVIVVP
IWWGSVPAKFKGLIDRTFLPGFAFQYQQGKTFPNRLLEGRTSRIIMTMDTPPWYYKWFQGAPALKQLDIATLAFSGFKRT
KSQMLGPVINAKAQQVQNWQAQVERHGRLGR

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.6.99.- [C]

Molecular weight: Translated: 21870; Mature: 21738

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKILVVSGHPKPDSLCEHLADTYAKAAGESHSVRLLKLCELEFEPNLAHGYHQEQPLE
CCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
ADLQSFQQAILWAEHLVIVVPIWWGSVPAKFKGLIDRTFLPGFAFQYQQGKTFPNRLLEG
HHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCHHEEECCCCCCHHHHHCC
RTSRIIMTMDTPPWYYKWFQGAPALKQLDIATLAFSGFKRTKSQMLGPVINAKAQQVQNW
CCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQVERHGRLGR
HHHHHHCCCCCC
>Mature Secondary Structure 
TKKILVVSGHPKPDSLCEHLADTYAKAAGESHSVRLLKLCELEFEPNLAHGYHQEQPLE
CCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHH
ADLQSFQQAILWAEHLVIVVPIWWGSVPAKFKGLIDRTFLPGFAFQYQQGKTFPNRLLEG
HHHHHHHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHCCCCHHEEECCCCCCHHHHHCC
RTSRIIMTMDTPPWYYKWFQGAPALKQLDIATLAFSGFKRTKSQMLGPVINAKAQQVQNW
CCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQVERHGRLGR
HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA