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The map label for this gene is 117676245

Identifier: 117676245

GI number: 117676245

Start: 194552

End: 195232

Strand: Reverse

Name: 117676245

Synonym: Shewana3_4306

Alternate gene names: NA

Gene position: 195232-194552 (Counterclockwise)

Preceding gene: 117676246

Following gene: 117676244

Centisome position: 69.99

GC content: 48.02

Gene sequence:

>681_bases
GTGTTTAGTTTGATGAGTCTGCAATTAACTTCACCTGGTTACAGCTGCATCAGCAAGCGGGCAAAGACAGTCAAAGTTAA
CTACCGCCCCCCTTGCCGAGGCGCGATTGCTCACTTAGTTGTCGATGCCACAGGACTGAAAGTATATGGCGAAGGTGAAT
GGAAAATGCGTAAACATGGTAAGGAAAAACGCCGAACTTGGCGTAAGTTGCACCTTGCGATAGATGCGGCCACACATGAA
GTCATCGCAGCCGAAGTCAGTTTAGAGAGTGTGGCAGATAGTGAGGTTCTCCCAACGTTATTAAACCCACTAAGGCGCAA
GGTAAAACAAGTGTCAGCTGACGGTGCTTATGACACCAAAAAATGTCATAAGCTGCTGAAACGCAGAGGGTGTAAACCTA
CGATACCGCCGCGAAAAAATGCAGGTTATTGGGAAGAAGGTCATCCCAGAAACGAGGCCGTCAGCGCTCTGAAAAGTGAT
GAACTCAAACAATGGAAACAAGAGAATGACTATCACCAACGCTCCCTGTCAGAAACAGCTATGTATCGTTACAAGCAACT
GATTAGCCCGAAATTGAGCCTGCGGGACTACAACGGCCAAGTCGGCGAGGCACTGGCTGGTGTGAAAGTGATGAACAAAG
TCATAGGACTGGGTATGCCTATTCGCCAGAGGGTCAATTAA

Upstream 100 bases:

>100_bases
ACTGCTGGTTGATTAATTCATAATATTCAATCGGTTACGTTAGAGGTGGCTAAATTCAACGCTTTTACCGGCCGGACCAC
TAGAAGGTTTTCTCAACTCA

Downstream 100 bases:

>100_bases
TACCAGGAACCCTTTTAGGAAAAGGCATACCTAAGATTGATTTAGGCAACAACGCCAAGGTTGTCTGTCCGCTCTTTCTG
CTGACTTGCACCTTTCAGTT

Product: IS4 family transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHGKEKRRTWRKLHLAIDAATHE
VIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTKKCHKLLKRRGCKPTIPPRKNAGYWEEGHPRNEAVSALKSD
ELKQWKQENDYHQRSLSETAMYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPIRQRVN

Sequences:

>Translated_226_residues
MFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHGKEKRRTWRKLHLAIDAATHE
VIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTKKCHKLLKRRGCKPTIPPRKNAGYWEEGHPRNEAVSALKSD
ELKQWKQENDYHQRSLSETAMYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPIRQRVN
>Mature_226_residues
MFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHGKEKRRTWRKLHLAIDAATHE
VIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTKKCHKLLKRRGCKPTIPPRKNAGYWEEGHPRNEAVSALKSD
ELKQWKQENDYHQRSLSETAMYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPIRQRVN

Specific function: Required for transposition of transposon Tn903 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 25592; Mature: 25592

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHG
CCCCEEEEECCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHCC
KEKRRTWRKLHLAIDAATHEVIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
KCHKLLKRRGCKPTIPPRKNAGYWEEGHPRNEAVSALKSDELKQWKQENDYHQRSLSETA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPIRQRVN
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MFSLMSLQLTSPGYSCISKRAKTVKVNYRPPCRGAIAHLVVDATGLKVYGEGEWKMRKHG
CCCCEEEEECCCCHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHHCC
KEKRRTWRKLHLAIDAATHEVIAAEVSLESVADSEVLPTLLNPLRRKVKQVSADGAYDTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
KCHKLLKRRGCKPTIPPRKNAGYWEEGHPRNEAVSALKSDELKQWKQENDYHQRSLSETA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
MYRYKQLISPKLSLRDYNGQVGEALAGVKVMNKVIGLGMPIRQRVN
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6270337; 6261245; 6271455 [H]