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The map label for this gene is 117676232

Identifier: 117676232

GI number: 117676232

Start: 175971

End: 177167

Strand: Direct

Name: 117676232

Synonym: Shewana3_4293

Alternate gene names: NA

Gene position: 175971-177167 (Clockwise)

Preceding gene: 117676230

Following gene: 117676233

Centisome position: 63.09

GC content: 34.09

Gene sequence:

>1197_bases
TTGGTGTTATTAGCAATGAGTAATAATGCACTCTCTAATGATGATATTGAGAGTTTTTCTGAATGGATACACAATGGTAA
TGTTGGAGGTACAGCGAGATCGTACTATTTCGAACAAGATTTTGACGATTCAAATACAGAGAATAGCTCGATTTGGGTGA
ATGGTGGTAATGTTACTTTTAATACATCAGAGTTTAATGGGTTTAAATTGGGAGGAGAGGTACAGGGGTCATACGTTAGT
AATATCAATGATGATGATGATACAACTGCGGGAGATATGAACGCACAAGGTCTTGTATTATCGGAAGCTTTTTTGAAGTA
TCAGTTTGGTGATACTGTGTTTTCTGGAGGTAGACAACACTTTTCATCACCCCTTATCGCTAACTCAGGTTCAAGATTGA
TAAATGAATCTTTTGAAATGTATCAGGTGTCTTCAAGTCATTTTGATGGTACTGATATTTCGATTGGATATGTGACTAAA
TATCAGACTCGAACAGATAAATCGTTTTATGTTGATAATGAATTTGTTGATTTTGATTTTAATGGTTCTGGCTCTCCTGG
CGATTTTTATAAAATAGGTAATGATGGCGTTTTTTTCGTACAAGTTAACAAGCGAATCGCTAAAAAATTCAAAGTTAACT
CACAGTACGCAAATGTAATAAATGAAGTCCAAGCACTTTATGCGGATGTCGAATATACATTGCCAACTAACTTTAACAGT
TATATTGCAATGCAATATTACAAAACTAAGTGGGATAAAAATGAACTAGTCGATAATGATCTTTTGGGCTTTAAAGTAGG
TTTCAGTCAGGGAGGAGTAGATTTTTTTGCTGGTTATACATTAGCTGGAGGAAATGAAGGAGATAATAGAGTTTTTAGAG
GCATTGGTCAAGGAGCTTATTATCAGTTTACTGCCACTACTAAAACTGCGGGTGTTGGGGCATTTGAATCTGGAACAAAT
TCGTATCAATTGGGGTTAGGTTCTGCTATCTCTAATCTTAAAGGTAAAATATTTTATACATCTTTTGACAATCCCATAGT
GGGAAAAGATTTAAATGAATGGACGGTTAATCTTGCATATCAATTTGATGGTAAACTCGAAAATATCGGTATATCAATTG
ATTTTTCAATATTGGATTATGAAAACAATCAAAAAGACGCTACAGATTTAAGAACGAAATTCACTTACAGCTTTTAA

Upstream 100 bases:

>100_bases
AATTTATTTGTTTATCTTTGATTTTAGTTTTACTTAATATAGTTTCTTATTTGTAACTTAACGTTAATAAGGTTTGTATG
TTTAAATATAATAAATATTT

Downstream 100 bases:

>100_bases
AGGTTGTAAATGTTTTTGACAAATGTTAATTCCCTAATAATTATATTGTAATTGTAAATTCAGGTCGTGTTAATGGGTGT
GCTTGGGTTTACAATTTTAT

Product: outer membrane porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MVLLAMSNNALSNDDIESFSEWIHNGNVGGTARSYYFEQDFDDSNTENSSIWVNGGNVTFNTSEFNGFKLGGEVQGSYVS
NINDDDDTTAGDMNAQGLVLSEAFLKYQFGDTVFSGGRQHFSSPLIANSGSRLINESFEMYQVSSSHFDGTDISIGYVTK
YQTRTDKSFYVDNEFVDFDFNGSGSPGDFYKIGNDGVFFVQVNKRIAKKFKVNSQYANVINEVQALYADVEYTLPTNFNS
YIAMQYYKTKWDKNELVDNDLLGFKVGFSQGGVDFFAGYTLAGGNEGDNRVFRGIGQGAYYQFTATTKTAGVGAFESGTN
SYQLGLGSAISNLKGKIFYTSFDNPIVGKDLNEWTVNLAYQFDGKLENIGISIDFSILDYENNQKDATDLRTKFTYSF

Sequences:

>Translated_398_residues
MVLLAMSNNALSNDDIESFSEWIHNGNVGGTARSYYFEQDFDDSNTENSSIWVNGGNVTFNTSEFNGFKLGGEVQGSYVS
NINDDDDTTAGDMNAQGLVLSEAFLKYQFGDTVFSGGRQHFSSPLIANSGSRLINESFEMYQVSSSHFDGTDISIGYVTK
YQTRTDKSFYVDNEFVDFDFNGSGSPGDFYKIGNDGVFFVQVNKRIAKKFKVNSQYANVINEVQALYADVEYTLPTNFNS
YIAMQYYKTKWDKNELVDNDLLGFKVGFSQGGVDFFAGYTLAGGNEGDNRVFRGIGQGAYYQFTATTKTAGVGAFESGTN
SYQLGLGSAISNLKGKIFYTSFDNPIVGKDLNEWTVNLAYQFDGKLENIGISIDFSILDYENNQKDATDLRTKFTYSF
>Mature_398_residues
MVLLAMSNNALSNDDIESFSEWIHNGNVGGTARSYYFEQDFDDSNTENSSIWVNGGNVTFNTSEFNGFKLGGEVQGSYVS
NINDDDDTTAGDMNAQGLVLSEAFLKYQFGDTVFSGGRQHFSSPLIANSGSRLINESFEMYQVSSSHFDGTDISIGYVTK
YQTRTDKSFYVDNEFVDFDFNGSGSPGDFYKIGNDGVFFVQVNKRIAKKFKVNSQYANVINEVQALYADVEYTLPTNFNS
YIAMQYYKTKWDKNELVDNDLLGFKVGFSQGGVDFFAGYTLAGGNEGDNRVFRGIGQGAYYQFTATTKTAGVGAFESGTN
SYQLGLGSAISNLKGKIFYTSFDNPIVGKDLNEWTVNLAYQFDGKLENIGISIDFSILDYENNQKDATDLRTKFTYSF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44191; Mature: 44191

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLLAMSNNALSNDDIESFSEWIHNGNVGGTARSYYFEQDFDDSNTENSSIWVNGGNVTF
CEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCEEEE
NTSEFNGFKLGGEVQGSYVSNINDDDDTTAGDMNAQGLVLSEAFLKYQFGDTVFSGGRQH
ECCCCCCEEECCEECCCEECCCCCCCCCCCCCCCCCEEEEEHHHHEEECCCHHHCCCHHH
FSSPLIANSGSRLINESFEMYQVSSSHFDGTDISIGYVTKYQTRTDKSFYVDNEFVDFDF
HCCCEEECCCCHHHHCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEECCEEEEEEC
NGSGSPGDFYKIGNDGVFFVQVNKRIAKKFKVNSQYANVINEVQALYADVEYTLPTNFNS
CCCCCCCCEEEECCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEECCCCCC
YIAMQYYKTKWDKNELVDNDLLGFKVGFSQGGVDFFAGYTLAGGNEGDNRVFRGIGQGAY
EEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHCCCCEE
YQFTATTKTAGVGAFESGTNSYQLGLGSAISNLKGKIFYTSFDNPIVGKDLNEWTVNLAY
EEEEECCCCCCCCCCCCCCCEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEE
QFDGKLENIGISIDFSILDYENNQKDATDLRTKFTYSF
EECCEEEEEEEEEEEEEEECCCCCCCHHHHEEEEEECC
>Mature Secondary Structure
MVLLAMSNNALSNDDIESFSEWIHNGNVGGTARSYYFEQDFDDSNTENSSIWVNGGNVTF
CEEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCEEEE
NTSEFNGFKLGGEVQGSYVSNINDDDDTTAGDMNAQGLVLSEAFLKYQFGDTVFSGGRQH
ECCCCCCEEECCEECCCEECCCCCCCCCCCCCCCCCEEEEEHHHHEEECCCHHHCCCHHH
FSSPLIANSGSRLINESFEMYQVSSSHFDGTDISIGYVTKYQTRTDKSFYVDNEFVDFDF
HCCCEEECCCCHHHHCCEEEEEECCCCCCCCEEEEEEEEEEECCCCCEEEECCEEEEEEC
NGSGSPGDFYKIGNDGVFFVQVNKRIAKKFKVNSQYANVINEVQALYADVEYTLPTNFNS
CCCCCCCCEEEECCCCEEEEEECHHHHHHHCCCHHHHHHHHHHHHHHHCEEEEECCCCCC
YIAMQYYKTKWDKNELVDNDLLGFKVGFSQGGVDFFAGYTLAGGNEGDNRVFRGIGQGAY
EEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCHHHHHCCCCEE
YQFTATTKTAGVGAFESGTNSYQLGLGSAISNLKGKIFYTSFDNPIVGKDLNEWTVNLAY
EEEEECCCCCCCCCCCCCCCEEEEEHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEEE
QFDGKLENIGISIDFSILDYENNQKDATDLRTKFTYSF
EECCEEEEEEEEEEEEEEECCCCCCCHHHHEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA