Definition | Shewanella sp. ANA-3 plasmid 1, complete sequence. |
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Accession | NC_008573 |
Length | 278,942 |
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The map label for this gene is 117676182
Identifier: 117676182
GI number: 117676182
Start: 116797
End: 117114
Strand: Direct
Name: 117676182
Synonym: Shewana3_4243
Alternate gene names: NA
Gene position: 116797-117114 (Clockwise)
Preceding gene: 117676181
Following gene: 117676183
Centisome position: 41.87
GC content: 42.77
Gene sequence:
>318_bases GTGCGCAAATACTTCTTCCAAGCGGTTTCAAATTCTAGCTGGGCAAACTTTGGTTACTTGGTTGCAACAGGCTTAAACAG TGACGTTGAAGCAGAACTCCAAATGCTATCCAGCCTACATGGTATTGGCGTGCTTATTCTCGACACCGAGTCACTTTTTG ATAGCCAAATACTTATACCAGCCCAAGAACGCAATAACGTAGATTGGCAGTCGGCTAATAGAATTGTCGCGGAGAATAGC GATTTTCATCACTACATCGAACAGGTTGGGATCTACAACCAAACAGGTCGTTTGATTCATAGTGCTTGGAATAAATAA
Upstream 100 bases:
>100_bases AAGGCTGGGATGAAATTGTGCGCAGTTGTGTACGTAGCGGCAATCATAGCTCGGTTCGTTTATGGTCGTTTGAAGTTAAA AGCACCTGACGAAAGGTAAC
Downstream 100 bases:
>100_bases TAAGGAAGAGAGTGGTCATGATCACAGAAGACCAACTAGAGCAGCTCTGCCTTGACTGGTTTACAGACCAAGGTTATCTA TACAAAAATGGCTACGACAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MRKYFFQAVSNSSWANFGYLVATGLNSDVEAELQMLSSLHGIGVLILDTESLFDSQILIPAQERNNVDWQSANRIVAENS DFHHYIEQVGIYNQTGRLIHSAWNK
Sequences:
>Translated_105_residues MRKYFFQAVSNSSWANFGYLVATGLNSDVEAELQMLSSLHGIGVLILDTESLFDSQILIPAQERNNVDWQSANRIVAENS DFHHYIEQVGIYNQTGRLIHSAWNK >Mature_105_residues MRKYFFQAVSNSSWANFGYLVATGLNSDVEAELQMLSSLHGIGVLILDTESLFDSQILIPAQERNNVDWQSANRIVAENS DFHHYIEQVGIYNQTGRLIHSAWNK
Specific function: Unknown
COG id: COG2958
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11931; Mature: 11931
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYFFQAVSNSSWANFGYLVATGLNSDVEAELQMLSSLHGIGVLILDTESLFDSQILIP CCCHHEEHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHCCCEEEEE AQERNNVDWQSANRIVAENSDFHHYIEQVGIYNQTGRLIHSAWNK CCCCCCCCHHCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHCCC >Mature Secondary Structure MRKYFFQAVSNSSWANFGYLVATGLNSDVEAELQMLSSLHGIGVLILDTESLFDSQILIP CCCHHEEHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCHHCCCEEEEE AQERNNVDWQSANRIVAENSDFHHYIEQVGIYNQTGRLIHSAWNK CCCCCCCCHHCCCEEEECCCHHHHHHHHHCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA