Definition Shewanella sp. ANA-3 plasmid 1, complete sequence.
Accession NC_008573
Length 278,942

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The map label for this gene is 117676181

Identifier: 117676181

GI number: 117676181

Start: 116180

End: 116785

Strand: Direct

Name: 117676181

Synonym: Shewana3_4242

Alternate gene names: NA

Gene position: 116180-116785 (Clockwise)

Preceding gene: 117676180

Following gene: 117676182

Centisome position: 41.65

GC content: 44.39

Gene sequence:

>606_bases
ATGGCAACCCGAGTAGAAATGATTATAGAAACGCTTAAGGCGCATCCTGAGCAAAAATTTACTGCTCGGGATTTAGCCAA
AGTGTTCATTGAACGCTATCCAGTCGAGATGGCAGAAAAGCAAACCAATCCAAGATATGACACCACTGAAAAGTTAATCG
CACAACTTGCGGCCGAAATCGGTGGTGAGCGCACAGTTGCCGCAAAAAAAGTGTGTCCTAATGTGGCAACAAGGGATAAA
CCGAGACCTCGTATTTATTTTTGGAATGCGAATCCTGAACTGGACACGGTCGAATTGTCGACAGATAGTGAAGATACCGA
TGTTCCAGAAGTGAATACGCCTCTCGCTGTTCAAAACTTCAGTGAACATGATTTATATCCATTATTAATCGAATTTTTAA
ATAAAGACCTTGGGCTGTATTGCCAGCGCATTGATGAACGAAAGTCGAAAAACTCACATGGGAATGGCGGGAACCATTGG
TTGCACCCTGATGTAGTGGCTCTTGAGCCTCTCGACCAAGGCTGGGATGAAATTGTGCGCAGTTGTGTACGTAGCGGCAA
TCATAGCTCGGTTCGTTTATGGTCGTTTGAAGTTAAAAGCACCTGA

Upstream 100 bases:

>100_bases
AGTCTAAAGAGCTAGAGCAGCTACGAGATACCTTGCTTCCTAAATTGCTTTCCGGCGAAATCGAGTTAGGAACAAGCGAA
GAATTGGTTGAGGCTATCTA

Downstream 100 bases:

>100_bases
CGAAAGGTAACGTGCGCAAATACTTCTTCCAAGCGGTTTCAAATTCTAGCTGGGCAAACTTTGGTTACTTGGTTGCAACA
GGCTTAAACAGTGACGTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MATRVEMIIETLKAHPEQKFTARDLAKVFIERYPVEMAEKQTNPRYDTTEKLIAQLAAEIGGERTVAAKKVCPNVATRDK
PRPRIYFWNANPELDTVELSTDSEDTDVPEVNTPLAVQNFSEHDLYPLLIEFLNKDLGLYCQRIDERKSKNSHGNGGNHW
LHPDVVALEPLDQGWDEIVRSCVRSGNHSSVRLWSFEVKST

Sequences:

>Translated_201_residues
MATRVEMIIETLKAHPEQKFTARDLAKVFIERYPVEMAEKQTNPRYDTTEKLIAQLAAEIGGERTVAAKKVCPNVATRDK
PRPRIYFWNANPELDTVELSTDSEDTDVPEVNTPLAVQNFSEHDLYPLLIEFLNKDLGLYCQRIDERKSKNSHGNGGNHW
LHPDVVALEPLDQGWDEIVRSCVRSGNHSSVRLWSFEVKST
>Mature_200_residues
ATRVEMIIETLKAHPEQKFTARDLAKVFIERYPVEMAEKQTNPRYDTTEKLIAQLAAEIGGERTVAAKKVCPNVATRDKP
RPRIYFWNANPELDTVELSTDSEDTDVPEVNTPLAVQNFSEHDLYPLLIEFLNKDLGLYCQRIDERKSKNSHGNGGNHWL
HPDVVALEPLDQGWDEIVRSCVRSGNHSSVRLWSFEVKST

Specific function: Unknown

COG id: COG2958

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22947; Mature: 22816

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATRVEMIIETLKAHPEQKFTARDLAKVFIERYPVEMAEKQTNPRYDTTEKLIAQLAAEI
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHH
GGERTVAAKKVCPNVATRDKPRPRIYFWNANPELDTVELSTDSEDTDVPEVNTPLAVQNF
CCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEECCC
SEHDLYPLLIEFLNKDLGLYCQRIDERKSKNSHGNGGNHWLHPDVVALEPLDQGWDEIVR
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH
SCVRSGNHSSVRLWSFEVKST
HHHHCCCCCEEEEEEEEECCC
>Mature Secondary Structure 
ATRVEMIIETLKAHPEQKFTARDLAKVFIERYPVEMAEKQTNPRYDTTEKLIAQLAAEI
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHH
GGERTVAAKKVCPNVATRDKPRPRIYFWNANPELDTVELSTDSEDTDVPEVNTPLAVQNF
CCCCHHHHHHHCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCEEECCC
SEHDLYPLLIEFLNKDLGLYCQRIDERKSKNSHGNGGNHWLHPDVVALEPLDQGWDEIVR
CCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHH
SCVRSGNHSSVRLWSFEVKST
HHHHCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA