Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621702

Identifier: 117621702

GI number: 117621702

Start: 57064

End: 57300

Strand: Direct

Name: 117621702

Synonym: BAPKO_2555

Alternate gene names: NA

Gene position: 57064-57300 (Clockwise)

Preceding gene: 117621701

Following gene: 117621703

Centisome position: 95.42

GC content: 19.41

Gene sequence:

>237_bases
ATGCAAAACATAGTAAAATTAAAGCAACTAAATAAACTAATAATAAAATATTTAAATAAAACATTTAATCACACAAAAAT
AATAATGGATATTTATAAATTTAGAACTTATGAAAAGAAAAATAAATATTGTGCAGCATTAAGAAAATTATTTAACATGT
TTACGGTTTTAAAACAAAAAGTATATGAATTTTATGGAAAAAATACCCCAAATAAGGACCACTTACAAAATGGATAA

Upstream 100 bases:

>100_bases
ATTTGGTACGTATCATAATGAATTATTAGAACTAATAAAAAATGAAAATATTTTTTTAATGCTAAAAGAAATTAGTAATA
AAGCTGTATAAGGGCTTAAT

Downstream 100 bases:

>100_bases
AAAACCAAATATTCTAACAATGGCAAATTTAAAAGGTGGTGTTGGCAAAAGCACATTAACAATTATGTTTGCCTATCTTC
TTAAAGATTTAGATAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MQNIVKLKQLNKLIIKYLNKTFNHTKIIMDIYKFRTYEKKNKYCAALRKLFNMFTVLKQKVYEFYGKNTPNKDHLQNG

Sequences:

>Translated_78_residues
MQNIVKLKQLNKLIIKYLNKTFNHTKIIMDIYKFRTYEKKNKYCAALRKLFNMFTVLKQKVYEFYGKNTPNKDHLQNG
>Mature_78_residues
MQNIVKLKQLNKLIIKYLNKTFNHTKIIMDIYKFRTYEKKNKYCAALRKLFNMFTVLKQKVYEFYGKNTPNKDHLQNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9507; Mature: 9507

Theoretical pI: Translated: 10.66; Mature: 10.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIVKLKQLNKLIIKYLNKTFNHTKIIMDIYKFRTYEKKNKYCAALRKLFNMFTVLKQK
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYEFYGKNTPNKDHLQNG
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MQNIVKLKQLNKLIIKYLNKTFNHTKIIMDIYKFRTYEKKNKYCAALRKLFNMFTVLKQK
CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYEFYGKNTPNKDHLQNG
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA