Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621681
Identifier: 117621681
GI number: 117621681
Start: 36811
End: 36957
Strand: Reverse
Name: 117621681
Synonym: BAPKO_2534
Alternate gene names: NA
Gene position: 36957-36811 (Counterclockwise)
Preceding gene: 117621682
Following gene: 117621680
Centisome position: 61.8
GC content: 19.05
Gene sequence:
>147_bases TTGATTACACAATTAAGAAATAATATTAAATCAGAAATATATAATATTATTGATACTATGAAGATCCTTAAGAAAATAAA TGACAAGAAGCTTTATGTAGAAGGAGGATATAAATCTTTTAAAATTTTTTATCAGATTTTAAATTAG
Upstream 100 bases:
>100_bases AGTGTTAATTTAAAAATTAACAAAAGAATTTCGGAAAAATAGTTTAAATTATATTCTTGATCAAAGTAATGAAAATCAAA GAAAAGAAGAATTTGAACAA
Downstream 100 bases:
>100_bases CAAAGACACAATCTTATGAATATATAAGGTTAGCCACAGCAGTTGAGACAGGGTTATTAGAAGAGAATTTTATAACTAGT AATGGAATAAGAGCCTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 48; Mature: 48
Protein sequence:
>48_residues MITQLRNNIKSEIYNIIDTMKILKKINDKKLYVEGGYKSFKIFYQILN
Sequences:
>Translated_48_residues MITQLRNNIKSEIYNIIDTMKILKKINDKKLYVEGGYKSFKIFYQILN >Mature_48_residues MITQLRNNIKSEIYNIIDTMKILKKINDKKLYVEGGYKSFKIFYQILN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5785; Mature: 5785
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITQLRNNIKSEIYNIIDTMKILKKINDKKLYVEGGYKSFKIFYQILN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHC >Mature Secondary Structure MITQLRNNIKSEIYNIIDTMKILKKINDKKLYVEGGYKSFKIFYQILN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA