Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

Click here to switch to the map view.

The map label for this gene is 117621680

Identifier: 117621680

GI number: 117621680

Start: 36485

End: 36577

Strand: Reverse

Name: 117621680

Synonym: BAPKO_2533

Alternate gene names: NA

Gene position: 36577-36485 (Counterclockwise)

Preceding gene: 117621681

Following gene: 117621679

Centisome position: 61.16

GC content: 18.28

Gene sequence:

>93_bases
ATGATGAATGAGATTTTTGAAAATCAAAAAGATTTTCTTAATAAACTTTTTAAAAGATATCAAGATCAAAAGGATAATAA
GAAAGTTTTATAA

Upstream 100 bases:

>100_bases
AAAAAAATCAAAACAAAATTCAATAAAACCCCTAAGATTTCAGCTTAAAAGTCAAGAAAGTTATGATTTTTATAAAAGTA
ATGCTAACTTTACAAATTTT

Downstream 100 bases:

>100_bases
GCAATTTGATTTTTATTGAAATAAAAAAAATATAAGATTAGAGATTATGAATAAAGGATTTAACAAATATAAAAAATATT
TTTTAAAAGGATATAGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 30

Protein sequence:

>30_residues
MMNEIFENQKDFLNKLFKRYQDQKDNKKVL

Sequences:

>Translated_30_residues
MMNEIFENQKDFLNKLFKRYQDQKDNKKVL
>Mature_30_residues
MMNEIFENQKDFLNKLFKRYQDQKDNKKVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3806; Mature: 3806

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNEIFENQKDFLNKLFKRYQDQKDNKKVL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMNEIFENQKDFLNKLFKRYQDQKDNKKVL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA