Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621673

Identifier: 117621673

GI number: 117621673

Start: 26919

End: 27104

Strand: Reverse

Name: 117621673

Synonym: BAPKO_2526

Alternate gene names: NA

Gene position: 27104-26919 (Counterclockwise)

Preceding gene: 117621674

Following gene: 117621672

Centisome position: 45.32

GC content: 24.73

Gene sequence:

>186_bases
ATGTCTAATTTATATAGAAGAGTGCTAAAGCTTGAAGTTGAAACTAAAAATTTAGTTGCTTTAGTTAATGAAGTTAAGTC
CAAATTGGGTAGAGTTGAAATAAGATTAAATAAAGTTGATGATGGGTTAAATAAGTCAAATGATAAATGTATGTTTTTTA
CTAATAAATTGTCTAAATGCACTTAA

Upstream 100 bases:

>100_bases
AAATTTTTTAGTATAATAGGGTGGAAAAAAATAAAAAATAAGATTTTAAACTAAAAAATGAGCTAGGAAAAGAATTGAGA
TATTATTTGAAGTTTTTAAA

Downstream 100 bases:

>100_bases
AATAGAAAGAATGGATACCAAAGAAGTAGGTTCTGAAACTTAAAGGTATTAAATATTGAGTGACATTTTGAAAATTTATT
TTTTAATTAATTATTTTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MSNLYRRVLKLEVETKNLVALVNEVKSKLGRVEIRLNKVDDGLNKSNDKCMFFTNKLSKCT

Sequences:

>Translated_61_residues
MSNLYRRVLKLEVETKNLVALVNEVKSKLGRVEIRLNKVDDGLNKSNDKCMFFTNKLSKCT
>Mature_60_residues
SNLYRRVLKLEVETKNLVALVNEVKSKLGRVEIRLNKVDDGLNKSNDKCMFFTNKLSKCT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7045; Mature: 6914

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNLYRRVLKLEVETKNLVALVNEVKSKLGRVEIRLNKVDDGLNKSNDKCMFFTNKLSKC
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEECCCCCC
T
C
>Mature Secondary Structure 
SNLYRRVLKLEVETKNLVALVNEVKSKLGRVEIRLNKVDDGLNKSNDKCMFFTNKLSKC
CHHHHHHHHHHCCHHHHHHHHHHHHHHHCEEEEEEECCCCCCCCCCCEEEEEECCCCCC
T
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA