Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621672
Identifier: 117621672
GI number: 117621672
Start: 25621
End: 26796
Strand: Reverse
Name: 117621672
Synonym: BAPKO_2525
Alternate gene names: NA
Gene position: 26796-25621 (Counterclockwise)
Preceding gene: 117621673
Following gene: 117621671
Centisome position: 44.81
GC content: 25.0
Gene sequence:
>1176_bases ATGCTAGATGAAGATAAAGATATAAATTTTATAAAATCAATAAAAGCTGTAAGTAGAAAGATACAAAATAACAAGGATCT TATTGAAAACGAAGCACAAACAAGGCAAAATCTTATTGATCCATTTTTAGATGCAATGGGCTATGATCACACTGATCTTT CAATTGTTAAAGTTGAAGATAAGGCGGATATTCCAAAACTGAATGGGTTAAAAAAAGTTGATTATATTATTTATCCAACA AAAAAGGATGAAGAGCCTACGATTTTGATAGAGGCTAAATATCATAATAGTAAGGAAAAGCTTGGAAATTATTTAAAGCA ATTAAAACCTTATTTTGAAAATATTCGTTCTCAAGAGAAGAGAGTTGAATTCGGCGTATTAACAGATGGTATAGAATATA GATTCTATTCAGACTTAGATAAAGATAATTTACTAGATAATGAGCCTTTTATGGTTATTAATTTAGAAAAATTAACAACT AAAGATTTTGGATATCTTAAAAAGTTTTCTAGGAATTATTTAAATATTGAGGCGGCCAGAGCTTTTGCATTAGAAAAAAA ATATACAGACAAGCTTTTAGCTTATTTAAAAAAAGAAATAAAAAATACAAGCGATGATTTTCTTGAATTTTTTAAAACCA AAATTGATTTTAAAAAAACACATTTAGACGAATTATTTAATAATATTATAAAAAATGTTTTTAGTGTTTTTAATGAAAAA CATGATATATTAGTAGACATTAAAAAAAATAACATAGAAGATGGTATAGATCCTGGCATAAAAGATAATAATATTAAAAC CGAAAATTTAAAAAAATTTGAAAAATTAAATTTGGATATGAAAGCAATATACAAAAACTTAGAAAGTTTTATTTTTGCTT TAAACTCTAATGAAATTGAGAAACTTGAAACAAATTGCTATACGGGATTTAGAGTACAGGGTAGGTATTTTGTAGATTTT AGCTTTAGACCTAGGGTAAATAAAATAAATATTACTATTACTGCTGCTCTAAATCAAATAACCTTAAAAGAAGGTTTTAC TAGATATGTTAAGAATATTGGCAAATGGGGTAGAGGGGATATTCAGATTTTATGTACATCGAGTCTTCAAATGGAAGAAA TCAAATATCTTATTAGATTAAGTTACAATAATATTATTTCAAAAAAAGTACATTAA
Upstream 100 bases:
>100_bases GAAGTAGGTTCTGAAACTTAAAGGTATTAAATATTGAGTGACATTTTGAAAATTTATTTTTTAATTAATTATTTTCTAAT TTTATTGTTAACATATAATT
Downstream 100 bases:
>100_bases ATAATATATAAACATTTTAAATGTTTTAGTGAACTAATATTTCTATAATTTTTTGATTATAGAAATATTAGTTCACAACT TATCACATATTCTCTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVEDKADIPKLNGLKKVDYIIYPT KKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEKRVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTT KDFGYLKKFSRNYLNIEAARAFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIEKLETNCYTGFRVQGRYFVDF SFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGDIQILCTSSLQMEEIKYLIRLSYNNIISKKVH
Sequences:
>Translated_391_residues MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVEDKADIPKLNGLKKVDYIIYPT KKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEKRVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTT KDFGYLKKFSRNYLNIEAARAFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIEKLETNCYTGFRVQGRYFVDF SFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGDIQILCTSSLQMEEIKYLIRLSYNNIISKKVH >Mature_391_residues MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVEDKADIPKLNGLKKVDYIIYPT KKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEKRVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTT KDFGYLKKFSRNYLNIEAARAFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIEKLETNCYTGFRVQGRYFVDF SFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGDIQILCTSSLQMEEIKYLIRLSYNNIISKKVH
Specific function: Unknown
COG id: COG4748
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45973; Mature: 45973
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVED CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC KADIPKLNGLKKVDYIIYPTKKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEK CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH RVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTTKDFGYLKKFSRNYLNIEAAR HEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHH AFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIE CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHH KLETNCYTGFRVQGRYFVDFSFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGD HHHHCCCCCEEECCEEEEEEEECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC IQILCTSSLQMEEIKYLIRLSYNNIISKKVH EEEEEECCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVED CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC KADIPKLNGLKKVDYIIYPTKKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEK CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH RVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTTKDFGYLKKFSRNYLNIEAAR HEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHH AFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIE CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHH KLETNCYTGFRVQGRYFVDFSFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGD HHHHCCCCCEEECCEEEEEEEECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC IQILCTSSLQMEEIKYLIRLSYNNIISKKVH EEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA