Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621672

Identifier: 117621672

GI number: 117621672

Start: 25621

End: 26796

Strand: Reverse

Name: 117621672

Synonym: BAPKO_2525

Alternate gene names: NA

Gene position: 26796-25621 (Counterclockwise)

Preceding gene: 117621673

Following gene: 117621671

Centisome position: 44.81

GC content: 25.0

Gene sequence:

>1176_bases
ATGCTAGATGAAGATAAAGATATAAATTTTATAAAATCAATAAAAGCTGTAAGTAGAAAGATACAAAATAACAAGGATCT
TATTGAAAACGAAGCACAAACAAGGCAAAATCTTATTGATCCATTTTTAGATGCAATGGGCTATGATCACACTGATCTTT
CAATTGTTAAAGTTGAAGATAAGGCGGATATTCCAAAACTGAATGGGTTAAAAAAAGTTGATTATATTATTTATCCAACA
AAAAAGGATGAAGAGCCTACGATTTTGATAGAGGCTAAATATCATAATAGTAAGGAAAAGCTTGGAAATTATTTAAAGCA
ATTAAAACCTTATTTTGAAAATATTCGTTCTCAAGAGAAGAGAGTTGAATTCGGCGTATTAACAGATGGTATAGAATATA
GATTCTATTCAGACTTAGATAAAGATAATTTACTAGATAATGAGCCTTTTATGGTTATTAATTTAGAAAAATTAACAACT
AAAGATTTTGGATATCTTAAAAAGTTTTCTAGGAATTATTTAAATATTGAGGCGGCCAGAGCTTTTGCATTAGAAAAAAA
ATATACAGACAAGCTTTTAGCTTATTTAAAAAAAGAAATAAAAAATACAAGCGATGATTTTCTTGAATTTTTTAAAACCA
AAATTGATTTTAAAAAAACACATTTAGACGAATTATTTAATAATATTATAAAAAATGTTTTTAGTGTTTTTAATGAAAAA
CATGATATATTAGTAGACATTAAAAAAAATAACATAGAAGATGGTATAGATCCTGGCATAAAAGATAATAATATTAAAAC
CGAAAATTTAAAAAAATTTGAAAAATTAAATTTGGATATGAAAGCAATATACAAAAACTTAGAAAGTTTTATTTTTGCTT
TAAACTCTAATGAAATTGAGAAACTTGAAACAAATTGCTATACGGGATTTAGAGTACAGGGTAGGTATTTTGTAGATTTT
AGCTTTAGACCTAGGGTAAATAAAATAAATATTACTATTACTGCTGCTCTAAATCAAATAACCTTAAAAGAAGGTTTTAC
TAGATATGTTAAGAATATTGGCAAATGGGGTAGAGGGGATATTCAGATTTTATGTACATCGAGTCTTCAAATGGAAGAAA
TCAAATATCTTATTAGATTAAGTTACAATAATATTATTTCAAAAAAAGTACATTAA

Upstream 100 bases:

>100_bases
GAAGTAGGTTCTGAAACTTAAAGGTATTAAATATTGAGTGACATTTTGAAAATTTATTTTTTAATTAATTATTTTCTAAT
TTTATTGTTAACATATAATT

Downstream 100 bases:

>100_bases
ATAATATATAAACATTTTAAATGTTTTAGTGAACTAATATTTCTATAATTTTTTGATTATAGAAATATTAGTTCACAACT
TATCACATATTCTCTTAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVEDKADIPKLNGLKKVDYIIYPT
KKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEKRVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTT
KDFGYLKKFSRNYLNIEAARAFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK
HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIEKLETNCYTGFRVQGRYFVDF
SFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGDIQILCTSSLQMEEIKYLIRLSYNNIISKKVH

Sequences:

>Translated_391_residues
MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVEDKADIPKLNGLKKVDYIIYPT
KKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEKRVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTT
KDFGYLKKFSRNYLNIEAARAFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK
HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIEKLETNCYTGFRVQGRYFVDF
SFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGDIQILCTSSLQMEEIKYLIRLSYNNIISKKVH
>Mature_391_residues
MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVEDKADIPKLNGLKKVDYIIYPT
KKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEKRVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTT
KDFGYLKKFSRNYLNIEAARAFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK
HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIEKLETNCYTGFRVQGRYFVDF
SFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGDIQILCTSSLQMEEIKYLIRLSYNNIISKKVH

Specific function: Unknown

COG id: COG4748

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45973; Mature: 45973

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVED
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
KADIPKLNGLKKVDYIIYPTKKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEK
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
RVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTTKDFGYLKKFSRNYLNIEAAR
HEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHH
AFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIE
CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHH
KLETNCYTGFRVQGRYFVDFSFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGD
HHHHCCCCCEEECCEEEEEEEECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC
IQILCTSSLQMEEIKYLIRLSYNNIISKKVH
EEEEEECCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDEDKDINFIKSIKAVSRKIQNNKDLIENEAQTRQNLIDPFLDAMGYDHTDLSIVKVED
CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC
KADIPKLNGLKKVDYIIYPTKKDEEPTILIEAKYHNSKEKLGNYLKQLKPYFENIRSQEK
CCCCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
RVEFGVLTDGIEYRFYSDLDKDNLLDNEPFMVINLEKLTTKDFGYLKKFSRNYLNIEAAR
HEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHCCCCCHHHHH
AFALEKKYTDKLLAYLKKEIKNTSDDFLEFFKTKIDFKKTHLDELFNNIIKNVFSVFNEK
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HDILVDIKKNNIEDGIDPGIKDNNIKTENLKKFEKLNLDMKAIYKNLESFIFALNSNEIE
CCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCHH
KLETNCYTGFRVQGRYFVDFSFRPRVNKINITITAALNQITLKEGFTRYVKNIGKWGRGD
HHHHCCCCCEEECCEEEEEEEECCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC
IQILCTSSLQMEEIKYLIRLSYNNIISKKVH
EEEEEECCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA