Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621669

Identifier: 117621669

GI number: 117621669

Start: 22598

End: 23146

Strand: Direct

Name: 117621669

Synonym: BAPKO_2522

Alternate gene names: NA

Gene position: 22598-23146 (Clockwise)

Preceding gene: 117621667

Following gene: 117621675

Centisome position: 37.79

GC content: 32.24

Gene sequence:

>549_bases
ATGAGGATTTTGGTTGGTGTTTGCATGATAATATTAGCTTTATTGGGTTGTTATTTGCCTGATAAGCAGAAACAACAAGC
CGTTCAAACTTTTTTTGAGAATTCACAAAGTAGTGATATAGGTTCTGATGAGATTGTTGCTGATGGGATATTTGATAATT
TAAAATTATATATGACTGAGCATAATTTGCTAGTTGATATAAAAAAGACCATAATCAGTTTAAAAGATCCTAATTATCGT
GCTGTACCCCCAGTTGACGACTATAATGAGGAGTATTTTAATAAATTCTTTTTAGAGCTAGGTTCTGAGCGATCTAAAGA
ATTGATTAAGTTGTTTGGTAGGATAAAAAATGATCGGAATGATGATAAATTTAAAAGAAAAGCTCATTGGCTATATTCAT
GTATAAGGGAGCTATATTCTTCAGATATTAAGTATTCTGGTGAAGACGGGTATGAATATTGGTATGGGGGGAGGGAATTT
TTTATGCCTAGGCCTACTATTGATGAACAATATTTAAAAGCGAAGAAAGTAATAGGACAGCAGGTTTAA

Upstream 100 bases:

>100_bases
TTTTAAAAGTTTACTAAAAATAGTATTTAGACAAATTTATATATTTATATATTTATATATTTGTAGATTGTTTTAGCAGC
AAGGTGGAGAAGGAGTATGT

Downstream 100 bases:

>100_bases
AATGATTTTTGGTTATTAATGTAATGAAGTCAGTTTTAGGTTAAAGATATTTGAATCTCTCTTAAGGTTAGCTTTTATAC
TAAAAAAATATAATATTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MRILVGVCMIILALLGCYLPDKQKQQAVQTFFENSQSSDIGSDEIVADGIFDNLKLYMTEHNLLVDIKKTIISLKDPNYR
AVPPVDDYNEEYFNKFFLELGSERSKELIKLFGRIKNDRNDDKFKRKAHWLYSCIRELYSSDIKYSGEDGYEYWYGGREF
FMPRPTIDEQYLKAKKVIGQQV

Sequences:

>Translated_182_residues
MRILVGVCMIILALLGCYLPDKQKQQAVQTFFENSQSSDIGSDEIVADGIFDNLKLYMTEHNLLVDIKKTIISLKDPNYR
AVPPVDDYNEEYFNKFFLELGSERSKELIKLFGRIKNDRNDDKFKRKAHWLYSCIRELYSSDIKYSGEDGYEYWYGGREF
FMPRPTIDEQYLKAKKVIGQQV
>Mature_182_residues
MRILVGVCMIILALLGCYLPDKQKQQAVQTFFENSQSSDIGSDEIVADGIFDNLKLYMTEHNLLVDIKKTIISLKDPNYR
AVPPVDDYNEEYFNKFFLELGSERSKELIKLFGRIKNDRNDDKFKRKAHWLYSCIRELYSSDIKYSGEDGYEYWYGGREF
FMPRPTIDEQYLKAKKVIGQQV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21369; Mature: 21369

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVGVCMIILALLGCYLPDKQKQQAVQTFFENSQSSDIGSDEIVADGIFDNLKLYMTE
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEC
HNLLVDIKKTIISLKDPNYRAVPPVDDYNEEYFNKFFLELGSERSKELIKLFGRIKNDRN
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
DDKFKRKAHWLYSCIRELYSSDIKYSGEDGYEYWYGGREFFMPRPTIDEQYLKAKKVIGQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEECCCCCCCCHHHHHHHHHHHC
QV
CC
>Mature Secondary Structure
MRILVGVCMIILALLGCYLPDKQKQQAVQTFFENSQSSDIGSDEIVADGIFDNLKLYMTE
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCEEEEEC
HNLLVDIKKTIISLKDPNYRAVPPVDDYNEEYFNKFFLELGSERSKELIKLFGRIKNDRN
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
DDKFKRKAHWLYSCIRELYSSDIKYSGEDGYEYWYGGREFFMPRPTIDEQYLKAKKVIGQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCEEECCCCCCCCHHHHHHHHHHHC
QV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA