Definition Borrelia afzelii PKo plasmid lp60-2, complete sequence.
Accession NC_008565
Length 59,804

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The map label for this gene is 117621667

Identifier: 117621667

GI number: 117621667

Start: 19291

End: 20145

Strand: Direct

Name: 117621667

Synonym: BAPKO_2520

Alternate gene names: NA

Gene position: 19291-20145 (Clockwise)

Preceding gene: 117621664

Following gene: 117621669

Centisome position: 32.26

GC content: 24.8

Gene sequence:

>855_bases
ATGAAAAAATGGATAAGTATTTTAAATATATTTTTATTTGTATTGTTTTTTTATTCTTGTTTGCCAACACTAGAATATTC
AGAAAGTATTAAGGCTGGAATTTTGGATTTTAAGCCAATTAAAGAAGATAATAATAAAAATATTGAAGAATATAGTAAAA
AAAATATTAAAGAAGATAATAACAATATTTATTGTGTTGATGAAGAATTTAGGTTAAATGAAATAAAAGAGGGAGAAGTT
TCGCAATTATTTGCAGGAGGTTATGTTACATGGGCAAAATCTGGTAATTTAAGGGCTATAAAAGATAAAAACAATAATTT
GATTCAAGATCTTAAAGGACTTAAGTATTCGTATATTTTTTCACCCATTCGATTTAAAACTTTATCATTACTATGGTTTA
GCTATAATTATTATATTAATGATAATAACTACAAGATATTGGGCAATGAAGTCCCAATAGCTAAAATAATAGCATTTGAG
TCAACTAAAGAGTTTGAAGAAAAATATGAAGTTAAAAGCCTAAAGTTAATTTCTGAGGGATCAAATATTGATTTTGAGCA
ATATAGAACTGGTGTTGCTAAAATTAGTTTAAAAGAGACTTCAAAAGAGCTTGGATACATTAATTCATATAATTTTGGAG
TTTTTAATAATGACTTAACAAATTCTTTTAAACTTCTTTATAAGAAGAGTGGATGTAGTTATATGCTTGCGCATTTTACT
ATAAAAGATAAACAAGCTAATGAAGATAAAACCTATGAAATTGCATTAGATATAAAGTTATTCGCTGATACTATTAAGCT
AATATTTGATAAGTATCCAAATTTATCAACTGAAAAATTAAAGGGTCTCTATTGA

Upstream 100 bases:

>100_bases
ATATGCACACTTTTTTTTGATATAATGAGAAAATATTGTGAATTTTTGATATTAAATTAATGGAGAGGCTTTAAAAATTA
CTTAAAGTAAAAAGAATTTT

Downstream 100 bases:

>100_bases
TGAATAATTAATGACCGAACGATATTTTGAAAATAGAAACATAAAATTCCATTTAGATTAAAAGTTTTTCTTAAAGTTTT
TTATATTATGATAGTTGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: Lipoprotein; S2 Lipoprotein

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKKWISILNIFLFVLFFYSCLPTLEYSESIKAGILDFKPIKEDNNKNIEEYSKKNIKEDNNNIYCVDEEFRLNEIKEGEV
SQLFAGGYVTWAKSGNLRAIKDKNNNLIQDLKGLKYSYIFSPIRFKTLSLLWFSYNYYINDNNYKILGNEVPIAKIIAFE
STKEFEEKYEVKSLKLISEGSNIDFEQYRTGVAKISLKETSKELGYINSYNFGVFNNDLTNSFKLLYKKSGCSYMLAHFT
IKDKQANEDKTYEIALDIKLFADTIKLIFDKYPNLSTEKLKGLY

Sequences:

>Translated_284_residues
MKKWISILNIFLFVLFFYSCLPTLEYSESIKAGILDFKPIKEDNNKNIEEYSKKNIKEDNNNIYCVDEEFRLNEIKEGEV
SQLFAGGYVTWAKSGNLRAIKDKNNNLIQDLKGLKYSYIFSPIRFKTLSLLWFSYNYYINDNNYKILGNEVPIAKIIAFE
STKEFEEKYEVKSLKLISEGSNIDFEQYRTGVAKISLKETSKELGYINSYNFGVFNNDLTNSFKLLYKKSGCSYMLAHFT
IKDKQANEDKTYEIALDIKLFADTIKLIFDKYPNLSTEKLKGLY
>Mature_284_residues
MKKWISILNIFLFVLFFYSCLPTLEYSESIKAGILDFKPIKEDNNKNIEEYSKKNIKEDNNNIYCVDEEFRLNEIKEGEV
SQLFAGGYVTWAKSGNLRAIKDKNNNLIQDLKGLKYSYIFSPIRFKTLSLLWFSYNYYINDNNYKILGNEVPIAKIIAFE
STKEFEEKYEVKSLKLISEGSNIDFEQYRTGVAKISLKETSKELGYINSYNFGVFNNDLTNSFKLLYKKSGCSYMLAHFT
IKDKQANEDKTYEIALDIKLFADTIKLIFDKYPNLSTEKLKGLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33167; Mature: 33167

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWISILNIFLFVLFFYSCLPTLEYSESIKAGILDFKPIKEDNNKNIEEYSKKNIKEDN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCC
NNIYCVDEEFRLNEIKEGEVSQLFAGGYVTWAKSGNLRAIKDKNNNLIQDLKGLKYSYIF
CCEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCEEEEECCCCCHHHHHHCCEEEEEE
SPIRFKTLSLLWFSYNYYINDNNYKILGNEVPIAKIIAFESTKEFEEKYEVKSLKLISEG
CCHHHHHEEEEEEEEEEEEECCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHEEEEECC
SNIDFEQYRTGVAKISLKETSKELGYINSYNFGVFNNDLTNSFKLLYKKSGCSYMLAHFT
CCCCHHHHHCCCEEEEEHHHHHHCCCEECCCCCEECCCCCHHEEEEEECCCCCEEEEEEE
IKDKQANEDKTYEIALDIKLFADTIKLIFDKYPNLSTEKLKGLY
EECCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCHHHHCCCC
>Mature Secondary Structure
MKKWISILNIFLFVLFFYSCLPTLEYSESIKAGILDFKPIKEDNNKNIEEYSKKNIKEDN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCC
NNIYCVDEEFRLNEIKEGEVSQLFAGGYVTWAKSGNLRAIKDKNNNLIQDLKGLKYSYIF
CCEEEEECCCCCCCCCCCCHHHHHCCCEEEEECCCCEEEEECCCCCHHHHHHCCEEEEEE
SPIRFKTLSLLWFSYNYYINDNNYKILGNEVPIAKIIAFESTKEFEEKYEVKSLKLISEG
CCHHHHHEEEEEEEEEEEEECCCEEEECCCCCEEEEEEECCHHHHHHHHHHHHEEEEECC
SNIDFEQYRTGVAKISLKETSKELGYINSYNFGVFNNDLTNSFKLLYKKSGCSYMLAHFT
CCCCHHHHHCCCEEEEEHHHHHHCCCEECCCCCEECCCCCHHEEEEEECCCCCEEEEEEE
IKDKQANEDKTYEIALDIKLFADTIKLIFDKYPNLSTEKLKGLY
EECCCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA