Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621668
Identifier: 117621668
GI number: 117621668
Start: 20892
End: 21902
Strand: Reverse
Name: 117621668
Synonym: BAPKO_2521
Alternate gene names: NA
Gene position: 21902-20892 (Counterclockwise)
Preceding gene: 117621670
Following gene: 117621666
Centisome position: 36.62
GC content: 30.76
Gene sequence:
>1011_bases ATGAAACATAATATAATTGCGAGCATGTTTGTCTTTTTATTTTTAACTTCCTGCAATCCAGACTTTAGCCCCAATCAAAA AGAAAAAACAAGCAAAGAAACATCTACTTTAACAGATTTGGGAAAAAGTAAAATCCCAGTATCAAGATCAAGAAAAAGTG CAGCTGATTTATCTGGAACAGATATAGCAACAAAAATCACCGTAGAAGAATCTGTAAATAATAAGAGAATAGGGGAGCCG TTAACATCGATCGGTGACCCGATTGATATGTCAACAGAAGAAAGATCAAGATCAATTGGGTTAACAAATGACATAGAAGC TGCAGAATTATTAGAATCTACAAAATCTCAAGGAACTTCATCTATAAAAGATGCCCAAAGTCCAAAAAAAACAGAACAAG AACTAGCTAAAACTGAAGAAGAACAAAGAAAAATTAAACAAAGGCAAAAAGAAGAAGAAGAAAAACAAAGGCAAAAAGAA GAAGAAGAAAAACAAAGGCAAAAAGAAGAAGAAGAAAAACAAAGGCAAAAAGAAGAAGAAGAAAAACGAGCTAAAGATAA AATCGAAATACTTACAAAAAAAATAGACGAGATAAATAGAGACATCGATGCTATCAAACATAAAAGTTTGTTATTAGAGG ATGTAAAGAGGGAAATAGTAGCAGCAACAGAAGCTATAGATAAAATTACAGGCCCTATATATGACCATTTTACCGATGGT AGCAATGCCATATACACTGTTTGGTATGATGATTTAGATACAGATTTAAAAGAGTTATTGGAAAAATTAAGAGATACTAG AAGCAATTTAAGAGTTAAATTAAATGTGGATAATCAAAGATATACTTGGGGAAGCAATGAACCCAAGCTAAAAGAAAACG TAAAGGTTGTCGAAATTGAATCGGACTTAGATAAACTAAAATCAGAATTAAAAGGGGTTAAAGAATACCTTAAAAACAAA TCTAATTTTGAAAAAATTAAAGAGAATATTGTTAACAGTGTTGATGAATAA
Upstream 100 bases:
>100_bases ATTATTGAATTATATTAATTATTGAATTATATTAAGTATTGAATTATATTAATTATTGAATTATATTAATTATTAGATTT TAAATAAGGAGAGTATTTTT
Downstream 100 bases:
>100_bases CTTTAGATATATCTAAACTTTTTTATATGTAAATAACAACTAGTAAGAAATTTGACTAGTTGTTATTTTTTGCAAATTAT TATAAATACAAAAACGTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Erp24 Protein; Erp26 Protein; Erp42 Protein; Erp22 Protein; ErpQ Protein; ErpM Protein; ErpB1 Protein
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKHNIIASMFVFLFLTSCNPDFSPNQKEKTSKETSTLTDLGKSKIPVSRSRKSAADLSGTDIATKITVEESVNNKRIGEP LTSIGDPIDMSTEERSRSIGLTNDIEAAELLESTKSQGTSSIKDAQSPKKTEQELAKTEEEQRKIKQRQKEEEEKQRQKE EEEKQRQKEEEEKQRQKEEEEKRAKDKIEILTKKIDEINRDIDAIKHKSLLLEDVKREIVAATEAIDKITGPIYDHFTDG SNAIYTVWYDDLDTDLKELLEKLRDTRSNLRVKLNVDNQRYTWGSNEPKLKENVKVVEIESDLDKLKSELKGVKEYLKNK SNFEKIKENIVNSVDE
Sequences:
>Translated_336_residues MKHNIIASMFVFLFLTSCNPDFSPNQKEKTSKETSTLTDLGKSKIPVSRSRKSAADLSGTDIATKITVEESVNNKRIGEP LTSIGDPIDMSTEERSRSIGLTNDIEAAELLESTKSQGTSSIKDAQSPKKTEQELAKTEEEQRKIKQRQKEEEEKQRQKE EEEKQRQKEEEEKQRQKEEEEKRAKDKIEILTKKIDEINRDIDAIKHKSLLLEDVKREIVAATEAIDKITGPIYDHFTDG SNAIYTVWYDDLDTDLKELLEKLRDTRSNLRVKLNVDNQRYTWGSNEPKLKENVKVVEIESDLDKLKSELKGVKEYLKNK SNFEKIKENIVNSVDE >Mature_336_residues MKHNIIASMFVFLFLTSCNPDFSPNQKEKTSKETSTLTDLGKSKIPVSRSRKSAADLSGTDIATKITVEESVNNKRIGEP LTSIGDPIDMSTEERSRSIGLTNDIEAAELLESTKSQGTSSIKDAQSPKKTEQELAKTEEEQRKIKQRQKEEEEKQRQKE EEEKQRQKEEEEKQRQKEEEEKRAKDKIEILTKKIDEINRDIDAIKHKSLLLEDVKREIVAATEAIDKITGPIYDHFTDG SNAIYTVWYDDLDTDLKELLEKLRDTRSNLRVKLNVDNQRYTWGSNEPKLKENVKVVEIESDLDKLKSELKGVKEYLKNK SNFEKIKENIVNSVDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38706; Mature: 38706
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHNIIASMFVFLFLTSCNPDFSPNQKEKTSKETSTLTDLGKSKIPVSRSRKSAADLSGT CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCHHHHHCCCCC DIATKITVEESVNNKRIGEPLTSIGDPIDMSTEERSRSIGLTNDIEAAELLESTKSQGTS CCEEEEEHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCH SIKDAQSPKKTEQELAKTEEEQRKIKQRQKEEEEKQRQKEEEEKQRQKEEEEKQRQKEEE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRAKDKIEILTKKIDEINRDIDAIKHKSLLLEDVKREIVAATEAIDKITGPIYDHFTDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC SNAIYTVWYDDLDTDLKELLEKLRDTRSNLRVKLNVDNQRYTWGSNEPKLKENVKVVEIE CCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCHHHCCEEEEEH SDLDKLKSELKGVKEYLKNKSNFEKIKENIVNSVDE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKHNIIASMFVFLFLTSCNPDFSPNQKEKTSKETSTLTDLGKSKIPVSRSRKSAADLSGT CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCHHHHHCCCCC DIATKITVEESVNNKRIGEPLTSIGDPIDMSTEERSRSIGLTNDIEAAELLESTKSQGTS CCEEEEEHHHCCCCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHCCCH SIKDAQSPKKTEQELAKTEEEQRKIKQRQKEEEEKQRQKEEEEKQRQKEEEEKQRQKEEE HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKRAKDKIEILTKKIDEINRDIDAIKHKSLLLEDVKREIVAATEAIDKITGPIYDHFTDG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCC SNAIYTVWYDDLDTDLKELLEKLRDTRSNLRVKLNVDNQRYTWGSNEPKLKENVKVVEIE CCEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCHHHCCEEEEEH SDLDKLKSELKGVKEYLKNKSNFEKIKENIVNSVDE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA