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The map label for this gene is ykoY [H]

Identifier: 116872392

GI number: 116872392

Start: 996756

End: 997523

Strand: Direct

Name: ykoY [H]

Synonym: lwe0974

Alternate gene names: 116872392

Gene position: 996756-997523 (Clockwise)

Preceding gene: 116872391

Following gene: 116872393

Centisome position: 35.42

GC content: 37.63

Gene sequence:

>768_bases
GTGGATACAGCAATGATTTTAGAGTACGGTTGGGTACTACTTGTCTTAATCGGTCTTGAGGGTATTTTAGCAGCAGATAA
TGCAGTAGTTATGGCTGTTATGGTAAAACACCTTCCAGATAAACAACAGAAAAAAGCATTATTTTATGGATTGATGGGTG
CCTTTGTTTTCCGTTTTGGCGCATTATTCTTAATCTCCTTCTTGGCAAATGTATGGCAAGTTCAAGCGCTAGGTGCCGCT
TATTTACTTTATATCGCTATTAGTCATATTTGGAAACATGCCAAAGGAAAAGATGGAGAAAAAGTAAAAAAAGAAAAAGC
AGGATCAGGTTTTTGGATGACAGTTTTAAAAGTAGAGATTGCAGATATAGCGTTTGCGATTGATTCCATGCTTGCTGCTG
TGGCACTTGCAATTACGCTTCCAGAAACCGGATGGGGCCATATTGGCGGTATTGATACTGGACAATTCACCATTATGTTC
TTAGGTGGTCTTGTTGGATTAATCATTATTCGTTTTGCAGCAACTCAATTTGTTAAATTACTAAAAAGCTATCCAAGCCT
CGAAACAGCTGCCTTTTTAATTGTTGGTTGGGTGGGCGTAAAACTAGTTATTTATACATTAGCACATCCAAGTCTTGCAG
TAATTCCGCATAGTTTTCCAGAGTCAACCCTGTGGAAATTAATTTTCTGGGGTGTGATGATTCTTATTATTTTGTGGGGA
TGGTTCGTTTCTTATCGAAGCAAGAAAAAAACAGAAACAATGAAATAA

Upstream 100 bases:

>100_bases
GTTAGCGAGACCTTTGCCTTTACGGGCAGGTCTCGCTTTTTTGTTTCTTCAAAATAGGAGATCTTTGACATTTTAATAGA
ACAAAGGAGGAAAAGAATTA

Downstream 100 bases:

>100_bases
TTTTAAATGACCAGAAGTGCATAGTGTACTTCTGGTTTTACATACAACGAGATGCTGAAATAATATTTTTATGATAGAGT
AGAAGGATGGTGAATGAGGA

Product: TerC family membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQALGAA
YLLYIAISHIWKHAKGKDGEKVKKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFTIMF
LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLAVIPHSFPESTLWKLIFWGVMILIILWG
WFVSYRSKKKTETMK

Sequences:

>Translated_255_residues
MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQALGAA
YLLYIAISHIWKHAKGKDGEKVKKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFTIMF
LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLAVIPHSFPESTLWKLIFWGVMILIILWG
WFVSYRSKKKTETMK
>Mature_255_residues
MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQKKALFYGLMGAFVFRFGALFLISFLANVWQVQALGAA
YLLYIAISHIWKHAKGKDGEKVKKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFTIMF
LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLAVIPHSFPESTLWKLIFWGVMILIILWG
WFVSYRSKKKTETMK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the terC family [H]

Homologues:

Organism=Escherichia coli, GI1788119, Length=206, Percent_Identity=23.3009708737864, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022493
- InterPro:   IPR005496 [H]

Pfam domain/function: PF03741 TerC [H]

EC number: NA

Molecular weight: Translated: 28196; Mature: 28196

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS00267 TACHYKININ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]