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The map label for this gene is yrrO [H]

Identifier: 116872361

GI number: 116872361

Start: 968975

End: 970201

Strand: Direct

Name: yrrO [H]

Synonym: lwe0943

Alternate gene names: 116872361

Gene position: 968975-970201 (Clockwise)

Preceding gene: 116872360

Following gene: 116872362

Centisome position: 34.43

GC content: 38.39

Gene sequence:

>1227_bases
ATGAGTAGGATTTTAAAAAAACCTGAAGTACTAGCTCCTGCTGGTAATTTAGAAAAATTAAAAATTGCCATTCGTTACGG
TGCGGATGCGGTTTATATTGGTGGTCAAGCATTCGGGCTTCGTTCTCGTGCTGGAAATTTTAGTTTTGAAGAAATGAAGT
TAGGTATCGCTTTTGCGCATGACCATAATGCAAAAGTTTATGTTGCTGCCAATATGGTTGCACATGCTGGAGATACGGAA
GGTGCTGGTGAATTTTTCCGGACATTACGTGATATTGGAATTGATGCAGTAATTGTTTCTGATCCAGCTTTAATTAGTAT
TTGTTTTCAAGACGCTCCGGGTTTACCAGTTCATTTATCTACGCAGGCTTCTGCTACAAACTATAAAACACTAGAGTTTT
GGAAAAAACAAGGATTAGAACGAGTAGTTCTTGCTCGTGAAGTGAGTATGCAAGAAATCCAAGAAATTGGAGAAAAAACG
GATGTTGAAATGGAAGCTTTCATTCATGGTGCCATGTGTATTTCTTATTCTGGTCGATGCACTTTATCGAACCATATGGC
GAACCGAGATGCCAATCGTGGCGGTTGTGCACAAAGTTGCCGCTGGAAATATGACTTATTTGAAATTGATAATGGAATTT
CTAAAAACTTAGTGGATGAGGATGAAGAACCTTTTTCAATGAGTGCTGTAGATTTATCCATGATTAAATATATTCCAGAT
ATGGTCAATGCTGGAGTAGATAGTTTGAAAATTGAAGGACGTATGAAATCCATTCATTATGTTTCCACTGTAGCGAGCGT
TTACCGACGTGCTGTGGATGCTTACTGTGAAGATCCAGAGAACTATGTGTTTGATCCAGCTTGGGAAGATGAATTATGGA
AAGTAGCTCAGCGCGAATTGTCGACAGGCTTTTTCTATAAAGAGCCAACTGAAGATGAACAATTATTTGGGAAAACAAGA
AAAATCCCTCAATACGCTTTTGCAGCTCAAGTTCTTGAGTATGACGAGGAAACTAAAATAGCTACTTTGCAACAACGGAA
TAATTTTGGTGTGGGAGAAGAAATTGAATTTTATGGACCTGGTGATACTGGATTTAAGCAAGTAGTCGAAGTACTTTGGA
ACGAAGACGGGGTAGAAATTGACCGTGCTCCGAATGCAATGATGACAATAAAAATGCCCGTAGATAAGCCAGTTAAGCCA
TTTTACTTTATGAGAAAGAAAAAATAA

Upstream 100 bases:

>100_bases
TTGTGAACAAGTTAACGGAATTACAGCCTAAAACAAGAAAACTTGATGCTGGTTTTTACTTGAAAAATCCGGATGATGTG
AAATAGGAGGAATAGTTTTT

Downstream 100 bases:

>100_bases
AAATAGTAGGATTGTCGGCTACACCTTAAGTAAGGTATAATAGATTTACTACATGAGAAGGAGGAGATTAATTATGATAG
GATGGATTATCGCAATTGCT

Product: peptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MSRILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRAGNFSFEEMKLGIAFAHDHNAKVYVAANMVAHAGDTE
GAGEFFRTLRDIGIDAVIVSDPALISICFQDAPGLPVHLSTQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKT
DVEMEAFIHGAMCISYSGRCTLSNHMANRDANRGGCAQSCRWKYDLFEIDNGISKNLVDEDEEPFSMSAVDLSMIKYIPD
MVNAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYCEDPENYVFDPAWEDELWKVAQRELSTGFFYKEPTEDEQLFGKTR
KIPQYAFAAQVLEYDEETKIATLQQRNNFGVGEEIEFYGPGDTGFKQVVEVLWNEDGVEIDRAPNAMMTIKMPVDKPVKP
FYFMRKKK

Sequences:

>Translated_408_residues
MSRILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRAGNFSFEEMKLGIAFAHDHNAKVYVAANMVAHAGDTE
GAGEFFRTLRDIGIDAVIVSDPALISICFQDAPGLPVHLSTQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKT
DVEMEAFIHGAMCISYSGRCTLSNHMANRDANRGGCAQSCRWKYDLFEIDNGISKNLVDEDEEPFSMSAVDLSMIKYIPD
MVNAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYCEDPENYVFDPAWEDELWKVAQRELSTGFFYKEPTEDEQLFGKTR
KIPQYAFAAQVLEYDEETKIATLQQRNNFGVGEEIEFYGPGDTGFKQVVEVLWNEDGVEIDRAPNAMMTIKMPVDKPVKP
FYFMRKKK
>Mature_407_residues
SRILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRAGNFSFEEMKLGIAFAHDHNAKVYVAANMVAHAGDTEG
AGEFFRTLRDIGIDAVIVSDPALISICFQDAPGLPVHLSTQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKTD
VEMEAFIHGAMCISYSGRCTLSNHMANRDANRGGCAQSCRWKYDLFEIDNGISKNLVDEDEEPFSMSAVDLSMIKYIPDM
VNAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYCEDPENYVFDPAWEDELWKVAQRELSTGFFYKEPTEDEQLFGKTRK
IPQYAFAAQVLEYDEETKIATLQQRNNFGVGEEIEFYGPGDTGFKQVVEVLWNEDGVEIDRAPNAMMTIKMPVDKPVKPF
YFMRKKK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=449, Percent_Identity=34.075723830735, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI87081910, Length=270, Percent_Identity=37.4074074074074, Blast_Score=182, Evalue=3e-47,
Organism=Escherichia coli, GI1789548, Length=336, Percent_Identity=32.4404761904762, Blast_Score=167, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 45887; Mature: 45755

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRAGNFSFEEMKLGIAFAH
CCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCEEEECCCCCCCCCHHHEEEEEEEEE
DHNAKVYVAANMVAHAGDTEGAGEFFRTLRDIGIDAVIVSDPALISICFQDAPGLPVHLS
CCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCEEEE
TQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKTDVEMEAFIHGAMCISYSGRC
CCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHEEEEEEEECCCE
TLSNHMANRDANRGGCAQSCRWKYDLFEIDNGISKNLVDEDEEPFSMSAVDLSMIKYIPD
EEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
MVNAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYCEDPENYVFDPAWEDELWKVAQREL
HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
STGFFYKEPTEDEQLFGKTRKIPQYAFAAQVLEYDEETKIATLQQRNNFGVGEEIEFYGP
HCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCEEEEECC
GDTGFKQVVEVLWNEDGVEIDRAPNAMMTIKMPVDKPVKPFYFMRKKK
CCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCCHHHHCCCC
>Mature Secondary Structure 
SRILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRAGNFSFEEMKLGIAFAH
CCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCEEEECCCCCCCCCHHHEEEEEEEEE
DHNAKVYVAANMVAHAGDTEGAGEFFRTLRDIGIDAVIVSDPALISICFQDAPGLPVHLS
CCCCEEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCEEEEEECCCCCCCEEEE
TQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKTDVEMEAFIHGAMCISYSGRC
CCCCCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHEEEEEEEECCCE
TLSNHMANRDANRGGCAQSCRWKYDLFEIDNGISKNLVDEDEEPFSMSAVDLSMIKYIPD
EEHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHH
MVNAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYCEDPENYVFDPAWEDELWKVAQREL
HHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHH
STGFFYKEPTEDEQLFGKTRKIPQYAFAAQVLEYDEETKIATLQQRNNFGVGEEIEFYGP
HCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEEEHHCCCCCCCCEEEEECC
GDTGFKQVVEVLWNEDGVEIDRAPNAMMTIKMPVDKPVKPFYFMRKKK
CCHHHHHHHHHHHCCCCCEEECCCCEEEEEECCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]