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The map label for this gene is yrrN [H]

Identifier: 116872360

GI number: 116872360

Start: 968052

End: 968960

Strand: Direct

Name: yrrN [H]

Synonym: lwe0942

Alternate gene names: 116872360

Gene position: 968052-968960 (Clockwise)

Preceding gene: 116872359

Following gene: 116872361

Centisome position: 34.4

GC content: 37.84

Gene sequence:

>909_bases
ATGGAAATCATTGCGACAGCAGATTCAATGACTCAAGCTGAAAAATTGCTTCGCGCGGGGGTAGACAGATTATATATAGG
TAATAGCCAATTTGGTTTAAGGTTACCTCATTCGTTTTCTGTCGAAGAATTACATGAAATAGTTCATTTAGCGCATGAAC
AAAAGAAAAAAGTAACTATAGCAGTAAATTCGTTAATGCATAACGAACATATGGAAGAGTTACCAGCATTTTTAGAAGAA
CTTGCTGAAATGAAAGTAGATGCAGTAGCTTGTGGCGATCCTGGTGCGATTATGCTTTTAAGTGAAATGAACCGACCGAT
ACCGTTTATTTATGATGCTCAGACATTTGTTACTAGTGCAGAACAAATCTCGTTTTGGGAGAAACAAGGAGCAATTGGGG
CGGTACTTGCTAGAGAATTAACAGAGGGTGAGATAAAAGCTATTGCCGAAAGCCTTCCTATTCCTGTGGAAGTACTGGTC
CACGGTCCAACTTGTATTCATCAATCTAAACGGAAATTAGTAACTAACTATCAACGAATTGTTGAAATGGAAGATGATAC
TTCAAAGGAACGCGGTCTTTATTTGCGTGAACCTAATGATGAAACTAGCCAATTGCCTATCTACGAGGATGAATCAGGAA
CGCATATTTTTGCTTCCGAGGATGTTTCTCTTGTGCCTTATTTGGCAGATTTATATGAAACGGGCTTGCAAACTTGGAAA
CTAGATGGTGTTTTAGCTGAATCAGATAACTTTGTTCAAATTGCTGCTTTATTTGTTGAGGCAAAAGAAGCTATTATAGA
GGGGCAATTTGTTGCAGAGTATTTTGTGAACAAGTTAACGGAATTACAGCCTAAAACAAGAAAACTTGATGCTGGTTTTT
ACTTGAAAAATCCGGATGATGTGAAATAG

Upstream 100 bases:

>100_bases
TAAGCTAGTCTCTTTTTTTATGCCAAAATTCTTATTGAGTAACAAGTCTTCTTGTGATACATTTATCAAGTAACGTTTTT
TGTAGAAATGAGGAGAAAAC

Downstream 100 bases:

>100_bases
GAGGAATAGTTTTTATGAGTAGGATTTTAAAAAAACCTGAAGTACTAGCTCCTGCTGGTAATTTAGAAAAATTAAAAATT
GCCATTCGTTACGGTGCGGA

Product: peptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEIIATADSMTQAEKLLRAGVDRLYIGNSQFGLRLPHSFSVEELHEIVHLAHEQKKKVTIAVNSLMHNEHMEELPAFLEE
LAEMKVDAVACGDPGAIMLLSEMNRPIPFIYDAQTFVTSAEQISFWEKQGAIGAVLARELTEGEIKAIAESLPIPVEVLV
HGPTCIHQSKRKLVTNYQRIVEMEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFASEDVSLVPYLADLYETGLQTWK
LDGVLAESDNFVQIAALFVEAKEAIIEGQFVAEYFVNKLTELQPKTRKLDAGFYLKNPDDVK

Sequences:

>Translated_302_residues
MEIIATADSMTQAEKLLRAGVDRLYIGNSQFGLRLPHSFSVEELHEIVHLAHEQKKKVTIAVNSLMHNEHMEELPAFLEE
LAEMKVDAVACGDPGAIMLLSEMNRPIPFIYDAQTFVTSAEQISFWEKQGAIGAVLARELTEGEIKAIAESLPIPVEVLV
HGPTCIHQSKRKLVTNYQRIVEMEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFASEDVSLVPYLADLYETGLQTWK
LDGVLAESDNFVQIAALFVEAKEAIIEGQFVAEYFVNKLTELQPKTRKLDAGFYLKNPDDVK
>Mature_302_residues
MEIIATADSMTQAEKLLRAGVDRLYIGNSQFGLRLPHSFSVEELHEIVHLAHEQKKKVTIAVNSLMHNEHMEELPAFLEE
LAEMKVDAVACGDPGAIMLLSEMNRPIPFIYDAQTFVTSAEQISFWEKQGAIGAVLARELTEGEIKAIAESLPIPVEVLV
HGPTCIHQSKRKLVTNYQRIVEMEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFASEDVSLVPYLADLYETGLQTWK
LDGVLAESDNFVQIAALFVEAKEAIIEGQFVAEYFVNKLTELQPKTRKLDAGFYLKNPDDVK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI87081910, Length=269, Percent_Identity=25.6505576208178, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788397, Length=286, Percent_Identity=26.2237762237762, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789548, Length=183, Percent_Identity=25.1366120218579, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 33922; Mature: 33922

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIATADSMTQAEKLLRAGVDRLYIGNSQFGLRLPHSFSVEELHEIVHLAHEQKKKVTI
CCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHCEEEE
AVNSLMHNEHMEELPAFLEELAEMKVDAVACGDPGAIMLLSEMNRPIPFIYDAQTFVTSA
EHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCEEECCHHHHHHH
EQISFWEKQGAIGAVLARELTEGEIKAIAESLPIPVEVLVHGPTCIHQSKRKLVTNYQRI
HHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
VEMEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFASEDVSLVPYLADLYETGLQTWK
HCCCCCCCHHCCEEEECCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHCCCCEEE
LDGVLAESDNFVQIAALFVEAKEAIIEGQFVAEYFVNKLTELQPKTRKLDAGFYLKNPDD
ECEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCEEECCCCC
VK
CC
>Mature Secondary Structure
MEIIATADSMTQAEKLLRAGVDRLYIGNSQFGLRLPHSFSVEELHEIVHLAHEQKKKVTI
CCEEECCHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHCEEEE
AVNSLMHNEHMEELPAFLEELAEMKVDAVACGDPGAIMLLSEMNRPIPFIYDAQTFVTSA
EHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCCCCEEECCHHHHHHH
EQISFWEKQGAIGAVLARELTEGEIKAIAESLPIPVEVLVHGPTCIHQSKRKLVTNYQRI
HHHHHHHHCCCHHHHHHHHHCHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHH
VEMEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFASEDVSLVPYLADLYETGLQTWK
HCCCCCCCHHCCEEEECCCCCCCCCCEEECCCCCEEEECCCCCHHHHHHHHHHCCCCEEE
LDGVLAESDNFVQIAALFVEAKEAIIEGQFVAEYFVNKLTELQPKTRKLDAGFYLKNPDD
ECEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHCCCCCEEECCCCC
VK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]