| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872247
Identifier: 116872247
GI number: 116872247
Start: 857799
End: 859175
Strand: Direct
Name: 116872247
Synonym: lwe0827
Alternate gene names: NA
Gene position: 857799-859175 (Clockwise)
Preceding gene: 116872246
Following gene: 116872248
Centisome position: 30.48
GC content: 38.49
Gene sequence:
>1377_bases GTGAGTCGCATTGACATCGGAGAAATAAGGACATTCGCGCTCCAATTAAAGGAAGCTAACCAACAAGGCAAAAGATGTAT TAAAGCTATCCAAACCGTCGTGACCAACTATGCGGAAGAGGATAGCTTAAAAGGGAAAGCGATAGACGCATCTAAGAATT ATTATCAAATGACCTATGTCCCCTTATGTAAGGCTATTTTGGAAGTAATGGAAGAGAGTCAAGAACGATTAAGGCAATAC ATGGACGATTTTCATGACCAAGTAGATAGTTCCCCCAACGCAAGAATCGATGAGGAAGGCTTATTCGAACTTGGCCAACA GATTGATCGTCTGGAAGCAAAAAAAGAAACGTTAGCCCAGCGAATGAACGTGGGAACGGAAGGGCAGATGCAAATTTATC GTTCTCAGTTAAGTAAAGCATATAAGAAGGAAAATATAGTAGAAAAGTATCTGGCTTTTGAACAAAGTCATACGGATTTT TTTGCGCATATAAGCGATTTAGTACAAAATATTCAGCAAACGATTCGAGAACTCCAGTCGAATATTCAGTTTAACCATCA TACTGGCACCTACGATCTAACGAAACTGGATTTGGACACCGTAAGCCGTTTGCAACAAGCGTTAGGAAAAGAATCCAATG CCCAACCAAAAAAATTTCCTTTTAACGAATACCAAAAAACATATACGGGTACCACATGGATATTAACAAGAGGTGGTATA ATAGACGTGGAAGCAACCACGGCCTACAACGAAGCCATCCTCCACGGCGAACTACCACCAGAATCAAATCAAGCCACAGA AGATGCCGAGCTATTAAAAGGAATAATCGCCTCCGTAAAAGCAGGAAAAGACCCATTAACCGGCCAAGAAATCAGTTTAC TGCAAGGAATAAGTATCATAGCTGGCACCACCTTCATGTACACAGCTGGAGCGTACCATGGGAAAAGGATGGGGATTCCT AAGCTTAAAGGTTTGTTGAGGAGGAAAGCTGGTGGGGGTAATGTTCCGAAGAGCTCAAAAAATAGTGCCCAATATCTAAA ATATAAAAATGAGTTAATGAAAGGTGATATACTCAAAAACTCAAAACCTATTATATCTGGTTCTGATTTAAAAGACTCTA AAGTAGTTTCTGAACTTACTAAGGATGGCAGCTCCATATCAGACTGGTCGAAAATGGAGTCAACTTATAGTTATGAAACG TCAATGGGAAAAGGGAAAATTCACTATTATCAGAATTTGAAAACTGGTGAAATTAATTTTTATGATGTGAAAATGAAAGT AAAAATTCCTAAAGACCTTAAAATTAGGAATGAACTTACTGATGATTTTTGGATTATAGACTTAGATAATAATTTTATAC CAATGGGGGTTAGATAG
Upstream 100 bases:
>100_bases AAGAAAACCAAGCAGCATGCGAACAAAAGAGGCAGACCTATCAACAAAGCATCTATCAATTAGAAACGAAACAACGAGCT TTACATAAGGAGTGGGGACA
Downstream 100 bases:
>100_bases TATGATTGTAAAAGTAATTTCTAACAAAGAAAATAGGGATATTACTATTAATAAACTTTATCCAGTTCTTATAAAAAAAG AAGATGAAATTAGAATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 458; Mature: 457
Protein sequence:
>458_residues MSRIDIGEIRTFALQLKEANQQGKRCIKAIQTVVTNYAEEDSLKGKAIDASKNYYQMTYVPLCKAILEVMEESQERLRQY MDDFHDQVDSSPNARIDEEGLFELGQQIDRLEAKKETLAQRMNVGTEGQMQIYRSQLSKAYKKENIVEKYLAFEQSHTDF FAHISDLVQNIQQTIRELQSNIQFNHHTGTYDLTKLDLDTVSRLQQALGKESNAQPKKFPFNEYQKTYTGTTWILTRGGI IDVEATTAYNEAILHGELPPESNQATEDAELLKGIIASVKAGKDPLTGQEISLLQGISIIAGTTFMYTAGAYHGKRMGIP KLKGLLRRKAGGGNVPKSSKNSAQYLKYKNELMKGDILKNSKPIISGSDLKDSKVVSELTKDGSSISDWSKMESTYSYET SMGKGKIHYYQNLKTGEINFYDVKMKVKIPKDLKIRNELTDDFWIIDLDNNFIPMGVR
Sequences:
>Translated_458_residues MSRIDIGEIRTFALQLKEANQQGKRCIKAIQTVVTNYAEEDSLKGKAIDASKNYYQMTYVPLCKAILEVMEESQERLRQY MDDFHDQVDSSPNARIDEEGLFELGQQIDRLEAKKETLAQRMNVGTEGQMQIYRSQLSKAYKKENIVEKYLAFEQSHTDF FAHISDLVQNIQQTIRELQSNIQFNHHTGTYDLTKLDLDTVSRLQQALGKESNAQPKKFPFNEYQKTYTGTTWILTRGGI IDVEATTAYNEAILHGELPPESNQATEDAELLKGIIASVKAGKDPLTGQEISLLQGISIIAGTTFMYTAGAYHGKRMGIP KLKGLLRRKAGGGNVPKSSKNSAQYLKYKNELMKGDILKNSKPIISGSDLKDSKVVSELTKDGSSISDWSKMESTYSYET SMGKGKIHYYQNLKTGEINFYDVKMKVKIPKDLKIRNELTDDFWIIDLDNNFIPMGVR >Mature_457_residues SRIDIGEIRTFALQLKEANQQGKRCIKAIQTVVTNYAEEDSLKGKAIDASKNYYQMTYVPLCKAILEVMEESQERLRQYM DDFHDQVDSSPNARIDEEGLFELGQQIDRLEAKKETLAQRMNVGTEGQMQIYRSQLSKAYKKENIVEKYLAFEQSHTDFF AHISDLVQNIQQTIRELQSNIQFNHHTGTYDLTKLDLDTVSRLQQALGKESNAQPKKFPFNEYQKTYTGTTWILTRGGII DVEATTAYNEAILHGELPPESNQATEDAELLKGIIASVKAGKDPLTGQEISLLQGISIIAGTTFMYTAGAYHGKRMGIPK LKGLLRRKAGGGNVPKSSKNSAQYLKYKNELMKGDILKNSKPIISGSDLKDSKVVSELTKDGSSISDWSKMESTYSYETS MGKGKIHYYQNLKTGEINFYDVKMKVKIPKDLKIRNELTDDFWIIDLDNNFIPMGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51845; Mature: 51713
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIDIGEIRTFALQLKEANQQGKRCIKAIQTVVTNYAEEDSLKGKAIDASKNYYQMTYV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEHHH PLCKAILEVMEESQERLRQYMDDFHDQVDSSPNARIDEEGLFELGQQIDRLEAKKETLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMNVGTEGQMQIYRSQLSKAYKKENIVEKYLAFEQSHTDFFAHISDLVQNIQQTIRELQS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NIQFNHHTGTYDLTKLDLDTVSRLQQALGKESNAQPKKFPFNEYQKTYTGTTWILTRGGI CCEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCE IDVEATTAYNEAILHGELPPESNQATEDAELLKGIIASVKAGKDPLTGQEISLLQGISII EEEEECCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AGTTFMYTAGAYHGKRMGIPKLKGLLRRKAGGGNVPKSSKNSAQYLKYKNELMKGDILKN HCCHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHCC SKPIISGSDLKDSKVVSELTKDGSSISDWSKMESTYSYETSMGKGKIHYYQNLKTGEINF CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEE YDVKMKVKIPKDLKIRNELTDDFWIIDLDNNFIPMGVR EEEEEEEECCCCCHHHHCCCCCEEEEEECCCEECCCCC >Mature Secondary Structure SRIDIGEIRTFALQLKEANQQGKRCIKAIQTVVTNYAEEDSLKGKAIDASKNYYQMTYV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEHHH PLCKAILEVMEESQERLRQYMDDFHDQVDSSPNARIDEEGLFELGQQIDRLEAKKETLAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RMNVGTEGQMQIYRSQLSKAYKKENIVEKYLAFEQSHTDFFAHISDLVQNIQQTIRELQS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NIQFNHHTGTYDLTKLDLDTVSRLQQALGKESNAQPKKFPFNEYQKTYTGTTWILTRGGI CCEECCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCE IDVEATTAYNEAILHGELPPESNQATEDAELLKGIIASVKAGKDPLTGQEISLLQGISII EEEEECCCHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH AGTTFMYTAGAYHGKRMGIPKLKGLLRRKAGGGNVPKSSKNSAQYLKYKNELMKGDILKN HCCHHHEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHCC SKPIISGSDLKDSKVVSELTKDGSSISDWSKMESTYSYETSMGKGKIHYYQNLKTGEINF CCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEE YDVKMKVKIPKDLKIRNELTDDFWIIDLDNNFIPMGVR EEEEEEEECCCCCHHHHCCCCCEEEEEECCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA