| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872246
Identifier: 116872246
GI number: 116872246
Start: 857434
End: 857802
Strand: Direct
Name: 116872246
Synonym: lwe0826
Alternate gene names: NA
Gene position: 857434-857802 (Clockwise)
Preceding gene: 116872245
Following gene: 116872247
Centisome position: 30.47
GC content: 43.63
Gene sequence:
>369_bases ATGGATACCAACAGTCAGCCTATAGAACAACAACTACATACCTTAAAAAAGCAACAAAAAGAACTAGAAGAAGCGTTGTT ACAACTAAAACGAGAACAAGATGAACAAGCATGGTTAGCCGAAGATTTTGCCCGTGTTTGCCTAGAAGAGCAGGAGTCCC TGGCACTTTTGCGCACAGTTTGGCAAGGGGAGGCTGCGCGCAGTTTTAGCTACTATTTGGAAGCGCTCCATGAAGAAGAA AAACAGCGATGGCGCAAAAAGATCCAAGAAAACCAAGCAGCATGCGAACAAAAGAGGCAGACCTATCAACAAAGCATCTA TCAATTAGAAACGAAACAACGAGCTTTACATAAGGAGTGGGGACAGTGA
Upstream 100 bases:
>100_bases GGTGGTGGAAACCGATGCGACACGGTTAAAAAACTTAGGCGAATCTTTTGCCATCAAAGACCGAGCACTCAGACGGATGA TGGGTTAAGAGGGGACATAC
Downstream 100 bases:
>100_bases GTCGCATTGACATCGGAGAAATAAGGACATTCGCGCTCCAATTAAAGGAAGCTAACCAACAAGGCAAAAGATGTATTAAA GCTATCCAAACCGTCGTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MDTNSQPIEQQLHTLKKQQKELEEALLQLKREQDEQAWLAEDFARVCLEEQESLALLRTVWQGEAARSFSYYLEALHEEE KQRWRKKIQENQAACEQKRQTYQQSIYQLETKQRALHKEWGQ
Sequences:
>Translated_122_residues MDTNSQPIEQQLHTLKKQQKELEEALLQLKREQDEQAWLAEDFARVCLEEQESLALLRTVWQGEAARSFSYYLEALHEEE KQRWRKKIQENQAACEQKRQTYQQSIYQLETKQRALHKEWGQ >Mature_122_residues MDTNSQPIEQQLHTLKKQQKELEEALLQLKREQDEQAWLAEDFARVCLEEQESLALLRTVWQGEAARSFSYYLEALHEEE KQRWRKKIQENQAACEQKRQTYQQSIYQLETKQRALHKEWGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14749; Mature: 14749
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTNSQPIEQQLHTLKKQQKELEEALLQLKREQDEQAWLAEDFARVCLEEQESLALLRTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQGEAARSFSYYLEALHEEEKQRWRKKIQENQAACEQKRQTYQQSIYQLETKQRALHKEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQ CC >Mature Secondary Structure MDTNSQPIEQQLHTLKKQQKELEEALLQLKREQDEQAWLAEDFARVCLEEQESLALLRTV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WQGEAARSFSYYLEALHEEEKQRWRKKIQENQAACEQKRQTYQQSIYQLETKQRALHKEW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA