Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130

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The map label for this gene is 116872244

Identifier: 116872244

GI number: 116872244

Start: 856162

End: 856791

Strand: Direct

Name: 116872244

Synonym: lwe0824

Alternate gene names: NA

Gene position: 856162-856791 (Clockwise)

Preceding gene: 116872243

Following gene: 116872245

Centisome position: 30.42

GC content: 26.03

Gene sequence:

>630_bases
ATGAATACAAATACTATAAAAGATTTAATAATTAGTATAGAACAAAGACCAAAAATGTTTCTCAGAAATAAAACAATAGA
CGCATTAAGTGATTTTTTAAATGGCTATTCGATGGGAAGTAGAGAAAAAATAATAAAAGGATATTCAATAGATTTCTGGT
TTTTTCATGAGTATATAAAGGACTATTATAACTATAGTTCCTCTACCTCTGGATGGACTAATATGATACTTGAACATTGT
TGTGATGATCAAGAAAAAGCCTTTCACGTTTTCTTTCAAAGATACCATGAGTTTATGGAAATCAGTGTAGAATCAGTCTT
TAAAGCAAATTTGGATAAAAGTAATAGTGTATTTCATTTTGATATGGCAAAGGGAAAAAAACTTATAACAAATTTAGATT
TACAACAGCTAGAACCAGTATACAAAAATCCAAAAAGCTATATAGTATTGCAACTATCTCTTGATAATGGTTTTATTTTG
TTAATAGAATCAGATTATCTATTCTATCAAAAAAGAAAATTATTTAAAAATCTTTCAGAAATTAATCATGAAATTTTAAA
CTTATTTGGTACAGCGCAACAACTTAAGCCAATTTCAATAGAGGTGTTAAATAATATTGAAATTTGTTAG

Upstream 100 bases:

>100_bases
AATAATAGTGGCCATTGAATCGTTTATGCCATTAGACTATAATAATATTTGTAAACAAGAAGATAGTTTTAGCTATTTGA
CTTGTAAAGGAGCTAACAAG

Downstream 100 bases:

>100_bases
CTTATACAAAATAAATTTTTCGAAAAAGAAAAAAGGCCTACTGAACCCCATAAGTTAGACTAAAAAATCTAACTTTAGAG
ACATATTTTATTGGCTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIKDYYNYSSSTSGWTNMILEHC
CDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHFDMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFIL
LIESDYLFYQKRKLFKNLSEINHEILNLFGTAQQLKPISIEVLNNIEIC

Sequences:

>Translated_209_residues
MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIKDYYNYSSSTSGWTNMILEHC
CDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHFDMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFIL
LIESDYLFYQKRKLFKNLSEINHEILNLFGTAQQLKPISIEVLNNIEIC
>Mature_209_residues
MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIKDYYNYSSSTSGWTNMILEHC
CDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHFDMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFIL
LIESDYLFYQKRKLFKNLSEINHEILNLFGTAQQLKPISIEVLNNIEIC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24694; Mature: 24694

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIK
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH
DYYNYSSSTSGWTNMILEHCCDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHF
HHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
DMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFILLIESDYLFYQKRKLFKNLSE
ECCCCCHHHHCCCHHHCCHHHCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
INHEILNLFGTAQQLKPISIEVLNNIEIC
HHHHHHHHHCCHHHCCCCEEEEECCCCCC
>Mature Secondary Structure
MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIK
CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH
DYYNYSSSTSGWTNMILEHCCDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHF
HHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
DMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFILLIESDYLFYQKRKLFKNLSE
ECCCCCHHHHCCCHHHCCHHHCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH
INHEILNLFGTAQQLKPISIEVLNNIEIC
HHHHHHHHHCCHHHCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA