Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116690016

Identifier: 116690016

GI number: 116690016

Start: 2212050

End: 2212736

Strand: Direct

Name: 116690016

Synonym: Bcen2424_1995

Alternate gene names: NA

Gene position: 2212050-2212736 (Clockwise)

Preceding gene: 116690015

Following gene: 116690017

Centisome position: 63.49

GC content: 70.01

Gene sequence:

>687_bases
ATGAAACGCTCCACCGCAGAGATCCTTCACGAGTACGGCCCGTTTCCGGGCGTCGACGGCGTGCACGGCGTCACGTTCGA
CGGGCAGCACGTGTGGTACGCGTCCGGCGACAAGCTGAATGCGCTCGATCCCGAGCGCGGCACGACCGTCCGCTCGCTCG
ACGTCGCCGCGCACGCGGGCACCGCGTTCGACGGCCGCCACCTGTTCCAGATCGTCGAGGACCGCATCGAGAAGATCGAC
CCCGAATCGGGTCGCGTGCTCGCGACGATCCCGGCGCCCGGCGGCGGCGCCGATTCGGGGCTCGCGTGGGCGGAAGGCAC
GCTGTGGGTCGGCCAGTACAGCGAACGCAAGATTCATCAGGTGGATCCGCAGTCGGGCGCCGTGCTGCGCACGATCGAAT
CGAACCGCTTCGTCACCGGCGTGACGTGGGTCGACGGCGAGCTGTGGCACGGCACGTGGGAAGCCGACCAGAGCGACCTG
CGACGCATCGATCCGCACACGGGCGAGGTGCTCGAGCAGATCGACATGCCGGCCGGCGTCGGCGTGTCGGGGCTCGAATC
CGACGGCCACGACCGCTTCTACTGCGGCGGCGGCAACAGCGGCAAGCTGCGTGCCGTGCGCCGCCCGGTGCGCACGCGTA
CCGCCACCGACGGCACGGACGTGATACCCGATCCGGCAGACGGCTGA

Upstream 100 bases:

>100_bases
TGGCTGACGCCGCCGCTGCCCGGATTCGCGACGACCTTGTTACTCCCGGTTGCGCTGCCGGGCGATTAGGATGGCCCCAT
CGAACGACGAGGTGACAAAC

Downstream 100 bases:

>100_bases
TCCACCGCGTGCCCACGCTGCCCGAACGCACCGCCGTGCCCCCGAGTGCAGGAATGAACAAGACGCCGCCACGACGGCAT
CGCTAAGATGCGCGCACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKRSTAEILHEYGPFPGVDGVHGVTFDGQHVWYASGDKLNALDPERGTTVRSLDVAAHAGTAFDGRHLFQIVEDRIEKID
PESGRVLATIPAPGGGADSGLAWAEGTLWVGQYSERKIHQVDPQSGAVLRTIESNRFVTGVTWVDGELWHGTWEADQSDL
RRIDPHTGEVLEQIDMPAGVGVSGLESDGHDRFYCGGGNSGKLRAVRRPVRTRTATDGTDVIPDPADG

Sequences:

>Translated_228_residues
MKRSTAEILHEYGPFPGVDGVHGVTFDGQHVWYASGDKLNALDPERGTTVRSLDVAAHAGTAFDGRHLFQIVEDRIEKID
PESGRVLATIPAPGGGADSGLAWAEGTLWVGQYSERKIHQVDPQSGAVLRTIESNRFVTGVTWVDGELWHGTWEADQSDL
RRIDPHTGEVLEQIDMPAGVGVSGLESDGHDRFYCGGGNSGKLRAVRRPVRTRTATDGTDVIPDPADG
>Mature_228_residues
MKRSTAEILHEYGPFPGVDGVHGVTFDGQHVWYASGDKLNALDPERGTTVRSLDVAAHAGTAFDGRHLFQIVEDRIEKID
PESGRVLATIPAPGGGADSGLAWAEGTLWVGQYSERKIHQVDPQSGAVLRTIESNRFVTGVTWVDGELWHGTWEADQSDL
RRIDPHTGEVLEQIDMPAGVGVSGLESDGHDRFYCGGGNSGKLRAVRRPVRTRTATDGTDVIPDPADG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24605; Mature: 24605

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSTAEILHEYGPFPGVDGVHGVTFDGQHVWYASGDKLNALDPERGTTVRSLDVAAHAG
CCCHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEHHCCC
TAFDGRHLFQIVEDRIEKIDPESGRVLATIPAPGGGADSGLAWAEGTLWVGQYSERKIHQ
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCEEEECCCCCCCEEE
VDPQSGAVLRTIESNRFVTGVTWVDGELWHGTWEADQSDLRRIDPHTGEVLEQIDMPAGV
CCCCCCEEEEEECCCCEEEEEEEECCEEECCCCCCCHHHHHHCCCCHHHHHHHHCCCCCC
GVSGLESDGHDRFYCGGGNSGKLRAVRRPVRTRTATDGTDVIPDPADG
CCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRSTAEILHEYGPFPGVDGVHGVTFDGQHVWYASGDKLNALDPERGTTVRSLDVAAHAG
CCCHHHHHHHHHCCCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCCCEEEEEEEHHCCC
TAFDGRHLFQIVEDRIEKIDPESGRVLATIPAPGGGADSGLAWAEGTLWVGQYSERKIHQ
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEEECCEEEECCCCCCCEEE
VDPQSGAVLRTIESNRFVTGVTWVDGELWHGTWEADQSDLRRIDPHTGEVLEQIDMPAGV
CCCCCCEEEEEECCCCEEEEEEEECCEEECCCCCCCHHHHHHCCCCHHHHHHHHCCCCCC
GVSGLESDGHDRFYCGGGNSGKLRAVRRPVRTRTATDGTDVIPDPADG
CCCCCCCCCCCEEEECCCCCCCCHHHHCCHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA