Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is argE [H]
Identifier: 116689966
GI number: 116689966
Start: 2162798
End: 2164018
Strand: Direct
Name: argE [H]
Synonym: Bcen2424_1945
Alternate gene names: 116689966
Gene position: 2162798-2164018 (Clockwise)
Preceding gene: 116689965
Following gene: 116689967
Centisome position: 62.08
GC content: 67.73
Gene sequence:
>1221_bases ATGTCCACTCTCGACGCGACGGCGCCGTCCGCCGCAACCGAAGGCGATGCATCGCTCGTCAGCCTGCCCTGGGTCAAGCA ACTCGTGTCGATGGACACGACGAGCCGCGTGCCGAACCTCGGCCTGATCGAAACGGTACGCGACGCGCTCGCCGCGAAGG GCATCGCGTCGACGATCACGCACGATCCGCGTGAAGGCTGGGCGAACCTGTTTGCCACCGTGCCCGCGCACGACGGTTCG ACGAACGGCGGCATCGTGCTGTCGGGCCACACCGACGTCGTGCCGGTCGACGGCCAGCAATGGGACAGCAACCCGTTCGC GCCGGAAATCCGCGACGGCCGCCTGTACGGCCGCGGCACCTGCGACATGAAGGGCTTCATCGGCGCGGCGCTCGCGCTGC TGCCCGAGATGCAGGCGACGAAGCTCGCGAAGCCGATCCATTTCGCGCTGTCCTACGACGAGGAAATCGGCTGCGCGGGC GCGCCGCTGATGATCGCCGATCTCGTGAAGCGCGGCGTGCAGCCGTCCGGCTGCATCGTCGGCGAGCCGACCAGCATGCG GCCGATCATCGCGCACAAGGGCATCAACGCGTACCGCTGCTGCGTGCGCGGCCACGCCGCACATTCGTCGCTGACGCCGA AGGGGCTCAACGCGATCGAGTATGCGGCGCGCCTGATCTGCCACATCCGCGACATCGCTGAGCGCTTCCGTGCCGAAGGC CCGTTCGACGAACTGTACGACGTGCCGTTCACCACCGCGCAGACGAGCACGATCCAGGGCGGCAACGCGATCAACACGGT GCCGGCCGAGTGCCGCTTCGACTTCGAATTCCGCAACCTGCCGACGCTCGATCCCGAGCAGATCTTCACGCGCATCGAAG CGTATGCGCAGGAAACGCTGCTGCCGCAGATGCTGCGCGAACATCCGAACGCCGCGATCGAATTCTCGAAGATCGCCGCG GCGCCCGGCCTCGACGCGACCGAGCAAGCCGCGATCACGCAGCTCGTGCGCGCGCTGACGGCCGACCAGGACAAGCGCAA GGTCGCGTACGGCACCGAGGCCGGGCTGTTCGCCCGCGCGGGCATTCCGAGCGTCGTGTGCGGGCCCGGCAACATCGAGC AGGCGCACAAGCCGAACGAATATGTCGAGCTCGCGCAGCTCGCCGGCTGCGAGCAGTTCCTGCGCAAGTTCATTCGCAGC ATGTCGGTCGACCCGCACTGA
Upstream 100 bases:
>100_bases ATCCTGACGGGCGCGACGTTGCTGCACCGCATCGCGCCCGACGAAGGCGGGCAGGCGCGTTTTTGAGTATGATTTCCCAT TCATCAGACGGAGTTTTGCC
Downstream 100 bases:
>100_bases CTGCCTCCCGCCACGCCGGCCCGCGTGTGCGGGTCGGCCCACTCCGCCACCCGCCACGTCATGTCGACTGAACAACAGGG CACTGCCCATACGACGATCG
Product: acetylornithine deacetylase
Products: NA
Alternate protein names: AO; Acetylornithinase; N-acetylornithinase; NAO [H]
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSTLDATAPSAATEGDASLVSLPWVKQLVSMDTTSRVPNLGLIETVRDALAAKGIASTITHDPREGWANLFATVPAHDGS TNGGIVLSGHTDVVPVDGQQWDSNPFAPEIRDGRLYGRGTCDMKGFIGAALALLPEMQATKLAKPIHFALSYDEEIGCAG APLMIADLVKRGVQPSGCIVGEPTSMRPIIAHKGINAYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIAERFRAEG PFDELYDVPFTTAQTSTIQGGNAINTVPAECRFDFEFRNLPTLDPEQIFTRIEAYAQETLLPQMLREHPNAAIEFSKIAA APGLDATEQAAITQLVRALTADQDKRKVAYGTEAGLFARAGIPSVVCGPGNIEQAHKPNEYVELAQLAGCEQFLRKFIRS MSVDPH
Sequences:
>Translated_406_residues MSTLDATAPSAATEGDASLVSLPWVKQLVSMDTTSRVPNLGLIETVRDALAAKGIASTITHDPREGWANLFATVPAHDGS TNGGIVLSGHTDVVPVDGQQWDSNPFAPEIRDGRLYGRGTCDMKGFIGAALALLPEMQATKLAKPIHFALSYDEEIGCAG APLMIADLVKRGVQPSGCIVGEPTSMRPIIAHKGINAYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIAERFRAEG PFDELYDVPFTTAQTSTIQGGNAINTVPAECRFDFEFRNLPTLDPEQIFTRIEAYAQETLLPQMLREHPNAAIEFSKIAA APGLDATEQAAITQLVRALTADQDKRKVAYGTEAGLFARAGIPSVVCGPGNIEQAHKPNEYVELAQLAGCEQFLRKFIRS MSVDPH >Mature_405_residues STLDATAPSAATEGDASLVSLPWVKQLVSMDTTSRVPNLGLIETVRDALAAKGIASTITHDPREGWANLFATVPAHDGST NGGIVLSGHTDVVPVDGQQWDSNPFAPEIRDGRLYGRGTCDMKGFIGAALALLPEMQATKLAKPIHFALSYDEEIGCAGA PLMIADLVKRGVQPSGCIVGEPTSMRPIIAHKGINAYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIAERFRAEGP FDELYDVPFTTAQTSTIQGGNAINTVPAECRFDFEFRNLPTLDPEQIFTRIEAYAQETLLPQMLREHPNAAIEFSKIAAA PGLDATEQAAITQLVRALTADQDKRKVAYGTEAGLFARAGIPSVVCGPGNIEQAHKPNEYVELAQLAGCEQFLRKFIRSM SVDPH
Specific function: Displays A Broad Specificity And Can Also Deacylate Substrates Such As Acetylarginine, Acetylhistidine Or Acetylglutamate Semialdehyde. [C]
COG id: COG0624
COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20A family. ArgE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790395, Length=363, Percent_Identity=31.6804407713499, Blast_Score=166, Evalue=2e-42, Organism=Escherichia coli, GI1788816, Length=336, Percent_Identity=27.9761904761905, Blast_Score=88, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010169 - InterPro: IPR001261 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.16 [H]
Molecular weight: Translated: 43671; Mature: 43540
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLDATAPSAATEGDASLVSLPWVKQLVSMDTTSRVPNLGLIETVRDALAAKGIASTIT CCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHC HDPREGWANLFATVPAHDGSTNGGIVLSGHTDVVPVDGQQWDSNPFAPEIRDGRLYGRGT CCHHHHHHHHEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCEEECCCC CDMKGFIGAALALLPEMQATKLAKPIHFALSYDEEIGCAGAPLMIADLVKRGVQPSGCIV CCHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEE GEPTSMRPIIAHKGINAYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIAERFRAEG CCCCCCCCHHHHCCCCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PFDELYDVPFTTAQTSTIQGGNAINTVPAECRFDFEFRNLPTLDPEQIFTRIEAYAQETL CHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH LPQMLREHPNAAIEFSKIAAAPGLDATEQAAITQLVRALTADQDKRKVAYGTEAGLFARA HHHHHHHCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECC GIPSVVCGPGNIEQAHKPNEYVELAQLAGCEQFLRKFIRSMSVDPH CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STLDATAPSAATEGDASLVSLPWVKQLVSMDTTSRVPNLGLIETVRDALAAKGIASTIT CCCCCCCCCCCCCCCCCEEECHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHC HDPREGWANLFATVPAHDGSTNGGIVLSGHTDVVPVDGQQWDSNPFAPEIRDGRLYGRGT CCHHHHHHHHEEEECCCCCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCEEECCCC CDMKGFIGAALALLPEMQATKLAKPIHFALSYDEEIGCAGAPLMIADLVKRGVQPSGCIV CCHHHHHHHHHHHHCCHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCEE GEPTSMRPIIAHKGINAYRCCVRGHAAHSSLTPKGLNAIEYAARLICHIRDIAERFRAEG CCCCCCCCHHHHCCCCHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC PFDELYDVPFTTAQTSTIQGGNAINTVPAECRFDFEFRNLPTLDPEQIFTRIEAYAQETL CHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH LPQMLREHPNAAIEFSKIAAAPGLDATEQAAITQLVRALTADQDKRKVAYGTEAGLFARA HHHHHHHCCCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEECC GIPSVVCGPGNIEQAHKPNEYVELAQLAGCEQFLRKFIRSMSVDPH CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9829957 [H]