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The map label for this gene is dadA [H]

Identifier: 116689936

GI number: 116689936

Start: 2125526

End: 2126827

Strand: Direct

Name: dadA [H]

Synonym: Bcen2424_1915

Alternate gene names: 116689936

Gene position: 2125526-2126827 (Clockwise)

Preceding gene: 116689933

Following gene: 116689937

Centisome position: 61.01

GC content: 71.81

Gene sequence:

>1302_bases
ATGGATGTCATCGTCATCGGCGGCGGAATCAGCGGCGTCGCCACCGCCTACCAGCTGCGCGCGGCCGGCCATCGCGTGTG
CGTGGTCGAACGCCACGCGACCGTCGCGCAAGGCGCGACCTACGGCGACGGCGGCGCGCTGCTGCCGAGCCCGCTCGACG
TCTGGTTCGGCCCGACGTTCATGCGCCAGCGCCAGCCGCGCGACAGCGGCATCGTCTACAAGCCGGGCTTCAACGGCGGC
GTGCGCCGCTTCGTCAAGCAGCTCGGCACGCTGCGCGAGCCCGACGTGTTCGCCGCGCAGTACGCGCGGCTGCGCCCGCT
GATCGACGTGTCGCGCGACACGCTCGCCGATATCGAGGCGCGCCTCGAGCTCGAATTCGAGCAGAAACCCGGCATCCTGC
ACGTGGTGCGCGATCCGCGCGACTGGGACGCGCTGCAGCCCGCGCTCGACCTGCTGCGCACGCTCGACCAGCCGTACCGC
ACGCTCACCGCCGACGAATGCGCGGCGCTCGAACCGTCGGTGCCGGCGGAGCCCGGCTTTGCCGGCGGCGTGCTGCTCGA
AACCGAGCGCACCGGCAACTGCCCGCTGTTCGCGAAACTGGTCAAGCAGACGCTCGACGAGCACGGCGTGCAGTTCCGCT
TCGGCGCGGACGTCACCGCGATCCGCATCGACAACGGCCGCGCGGCGGTCGAGCTCGTGCCGCCGGGCAACCGGAACACG
GCGAAGGCGCGCGAGGTCGACGTGATGTCCGCCGACGCGATCGTGGTCGCCGCCGGCGCGGGCAGCCTCCCGCTGCTCGA
ACGGCTCGGCTGGCGCTTGCCGCTGCATCCGGTCCGCACCCATACGCTCACCGCGCCGGTCGCGTACGAAGAACACGCAC
CGCACCTGAGCGTCGTCGATGCGATCAAGCGCATCTCGATCACGCGTACCCACCAGCGGTTGCGTATCGGCGGCGGCGCC
GTGCTGCAGAGCCTCGCCGATACCGCGAAGCCGCTCGCCGAGCCGCTGTCCGAGGCCGCGCTCGCGCTGCTCGGCCAGGC
CGTCCACGACTGGGTGCCCGGCGCCGCGAAGATTTCGGCCGCGCTGTCGTGGCAAGGCATGCAACTGCTGTCGCCGGACG
GCCTGCCCGTCGTGGGTCCGACCCCGCATCCACGCGTGTTCGTCAATTTCGGCCATGGCCCGGCCGGCTGGGGCCTCGCG
TGCGGGTCTGCTAAAGTGGTGACCGACTATCTGGGCGGCAACGTCCAGCACTGGCCCGCCGACACGCTCGCCGCGCTGAG
CGCCGGCCGCTTCACGACCTGA

Upstream 100 bases:

>100_bases
CTCGCGCACTTTTGGCGCTATCATTCCGGGTTCACCGGGCCCGGGCCCTCAGCGAATTCTCACCGGGCGGCGTGCGCGCC
GCCCGTCATCGAAGCAATCC

Downstream 100 bases:

>100_bases
CCGCCGCGGGGCCGACTCGTGGCGGCATCCTTGCCAGCCGCCACGATCCCGCGATGACCGTTACCCACCCGCTTCCCGAT
TCCGATCCGATCGCGCTCTT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMRQRQPRDSGIVYKPGFNGG
VRRFVKQLGTLREPDVFAAQYARLRPLIDVSRDTLADIEARLELEFEQKPGILHVVRDPRDWDALQPALDLLRTLDQPYR
TLTADECAALEPSVPAEPGFAGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGADVTAIRIDNGRAAVELVPPGNRNT
AKAREVDVMSADAIVVAAGAGSLPLLERLGWRLPLHPVRTHTLTAPVAYEEHAPHLSVVDAIKRISITRTHQRLRIGGGA
VLQSLADTAKPLAEPLSEAALALLGQAVHDWVPGAAKISAALSWQGMQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLA
CGSAKVVTDYLGGNVQHWPADTLAALSAGRFTT

Sequences:

>Translated_433_residues
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMRQRQPRDSGIVYKPGFNGG
VRRFVKQLGTLREPDVFAAQYARLRPLIDVSRDTLADIEARLELEFEQKPGILHVVRDPRDWDALQPALDLLRTLDQPYR
TLTADECAALEPSVPAEPGFAGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGADVTAIRIDNGRAAVELVPPGNRNT
AKAREVDVMSADAIVVAAGAGSLPLLERLGWRLPLHPVRTHTLTAPVAYEEHAPHLSVVDAIKRISITRTHQRLRIGGGA
VLQSLADTAKPLAEPLSEAALALLGQAVHDWVPGAAKISAALSWQGMQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLA
CGSAKVVTDYLGGNVQHWPADTLAALSAGRFTT
>Mature_433_residues
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTFMRQRQPRDSGIVYKPGFNGG
VRRFVKQLGTLREPDVFAAQYARLRPLIDVSRDTLADIEARLELEFEQKPGILHVVRDPRDWDALQPALDLLRTLDQPYR
TLTADECAALEPSVPAEPGFAGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGADVTAIRIDNGRAAVELVPPGNRNT
AKAREVDVMSADAIVVAAGAGSLPLLERLGWRLPLHPVRTHTLTAPVAYEEHAPHLSVVDAIKRISITRTHQRLRIGGGA
VLQSLADTAKPLAEPLSEAALALLGQAVHDWVPGAAKISAALSWQGMQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLA
CGSAKVVTDYLGGNVQHWPADTLAALSAGRFTT

Specific function: Oxidative deamination of D-amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=447, Percent_Identity=28.6353467561521, Blast_Score=176, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 46283; Mature: 46283

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTF
CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCCHHHCCCHH
MRQRQPRDSGIVYKPGFNGGVRRFVKQLGTLREPDVFAAQYARLRPLIDVSRDTLADIEA
HHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCE
RLELEFEQKPGILHVVRDPRDWDALQPALDLLRTLDQPYRTLTADECAALEPSVPAEPGF
EEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCCCCCCC
AGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGADVTAIRIDNGRAAVELVPPGNRNT
CCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEEECCCCCCC
AKAREVDVMSADAIVVAAGAGSLPLLERLGWRLPLHPVRTHTLTAPVAYEEHAPHLSVVD
CCHHEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCCCCCEEEECCCCHHCCCCCHHHHH
AIKRISITRTHQRLRIGGGAVLQSLADTAKPLAEPLSEAALALLGQAVHDWVPGAAKISA
HHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALSWQGMQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLACGSAKVVTDYLGGNVQHWPA
HHCCCCCEEECCCCCEECCCCCCCEEEEECCCCCCCCCEECCCHHHHHHHHCCCCCCCCC
DTLAALSAGRFTT
HHHHHHCCCCCCC
>Mature Secondary Structure
MDVIVIGGGISGVATAYQLRAAGHRVCVVERHATVAQGATYGDGGALLPSPLDVWFGPTF
CEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCHHHCCCEECCCCCCCCCCCHHHCCCHH
MRQRQPRDSGIVYKPGFNGGVRRFVKQLGTLREPDVFAAQYARLRPLIDVSRDTLADIEA
HHHCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCE
RLELEFEQKPGILHVVRDPRDWDALQPALDLLRTLDQPYRTLTADECAALEPSVPAEPGF
EEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCCCCCCC
AGGVLLETERTGNCPLFAKLVKQTLDEHGVQFRFGADVTAIRIDNGRAAVELVPPGNRNT
CCCEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCEEEEEECCCCEEEEEECCCCCCC
AKAREVDVMSADAIVVAAGAGSLPLLERLGWRLPLHPVRTHTLTAPVAYEEHAPHLSVVD
CCHHEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCCCCCEEEECCCCHHCCCCCHHHHH
AIKRISITRTHQRLRIGGGAVLQSLADTAKPLAEPLSEAALALLGQAVHDWVPGAAKISA
HHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ALSWQGMQLLSPDGLPVVGPTPHPRVFVNFGHGPAGWGLACGSAKVVTDYLGGNVQHWPA
HHCCCCCEEECCCCCEECCCCCCCEEEEECCCCCCCCCEECCCHHHHHHHHCCCCCCCCC
DTLAALSAGRFTT
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA