Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689855
Identifier: 116689855
GI number: 116689855
Start: 2036768
End: 2038600
Strand: Direct
Name: 116689855
Synonym: Bcen2424_1834
Alternate gene names: NA
Gene position: 2036768-2038600 (Clockwise)
Preceding gene: 116689854
Following gene: 116689856
Centisome position: 58.46
GC content: 69.18
Gene sequence:
>1833_bases ATGCCGGATGCTCGAAACCGGCTCGACCGCGCGCACCCGCGCCGGCCGCCTGCCCATAACAAATCGCTCATCTGCATGAA GCCTGTCGTCCGCCTCACCGCCTCCGCCACGCGTGCGCTGCCACGCTGGCTGCTGCTCACGCTCTGCTTCGTCTACGCGG CGTTCGGCCTGTTCGGCCGCGACCCGTGGAAAAACGAGGACGCGGCGGGCTTCGGCGTGATGTGGACGATGGCCAAGGGC GGCTGGCACGACTGGCTGCTGCCGAACCTGGTCGGCAAGTTCATCACGACCGACGGGCCGCTCGGCTACTGGCTCGGTGC GCTGTCGATCCGCGGCCTCGGCCCCTGGGTCGACGCGAGCAACGCGTCGCGCGTCGATACCGGCGTGCTGTTCTGCGTCG CATGCGCATTCGTCTGGTACGCGGCCTACCTGCTCGGCCGGCGCGCCGAGGTTCAACCGTTCAAATACGCATTCGGCGGC GAACCCGAGCCCCGCGACTACGGCCGCACGCTCGCGGACGGCGCGCTGCTGGTGCTCGTCGCCTGCTTCGGCCTCGCGGA ACGCGGGCACGAAACGACGCCGCAGCTCGCGCAGTTCGCGTGGATCGCGATGCTCGTGTACGGGATCGTGCGCGGCATCG ACAAACCGCTGCAAGGCGCACTGTGGTGGGGTCTCGCGATCGGCCTCGTTGCGCTGTCCGGCAACCCGGTGCTGGTCGTC GCACTGCTCGCGGGCACGGCCGCGCTGTGGCTCGTCACGCCCGAGATGCGCAACCTGCGCCTGCCGCTGGTCGGCGTGCC GCTCGCGGCCGCGATCTTCGCGCTGTGGCCGCTCGCCGCCTTCGTCGCGGCGCCCGACGACGCCGCGTGGTTCTTCAACC AGTGGATCCACGGCAGCCTGATGCGCTTTTCGGGCCCGCCGACGGCCGTGCTCGGCTATGCGGCGAAGAACCTGCCGTTG TTCACGTGGCCTGCGTGGCCGCTCGCGATCTGGGCGTGGTGGAGCTGGGCCGGCATGCGTCGTCGGGCGCACATCGCGAT TCCGCTGTCGGTCGCCGTGCCGCTCGTCGCGCTCGTGATCCTGCAAAGCCAGCAGTCGAACCGCATGTACATGCTGCTGC TACCGCCGCTCGCGGTGCTCGCGACGTTCGCGCTGCCGACCCTCAAGCGCGGCGCGATCAACGCGATCGACTGGTTCGCG GTGCTGAGCTTCACGATCCTCGGCACCTTCGTGTGGCTCGTCTGGCTCGCGTCGCTCACCGGCTTCCCGCATCCGCTCGC GCGCAACCTCGCGCGCCTCGTGCCCGGCTACGAGCCGCATTTCAAGATCCTGTCGTTCATCTGCGCGGTGATCGTCACCG TGTGCTGGTGCTTCCTCGCGCGCTGGCGCGTGTCGCGACAGCCTAAGGTGCTGTGGCGCAGCGTCGTGCTGTCGAGCGCG GGCACCACGCTGATGTGGGTGCTGCTGATGACGCTGTGGCTGCCGATCGTCAACTACGGCCGGACCTATCGCGACGTCGC GCAACAGATCGCCGTGCACCTGCCGTCCGACTACGAGTGCATTTCGCCGGTGCGGCTCGGCGACGCGCAGATCGCGACCT TCGCGTATTTCGGCAACATGCGCTTCGATTTCTCCGGCGACTGCGACGTGATCCTGCGTCAGGACCGCGCCGACTTCGGC GAGCCGAGCGCGATGTCGCAATACGTGTGGCGTCTCGTCTGGGAAGGCCGCCGCGTCGCCGACCGCGACGAGCGCTTCCG CCTGTACGAGCGCATCGAACGGCCGAAGACGCCCGTCAAACGGCGTCCGCCGCGCCGCCAGGCGGCCGATTGA
Upstream 100 bases:
>100_bases AAGGGCAGCCCAGGCTGCCCTTTTTTGTCTCTGCTCGCCCGGAAAGACGCCGCCCGGCGCCCGGGAAACGACCTGACGCA CAACAGCGGGCGCGACTACA
Downstream 100 bases:
>100_bases CGATGTTCGGCGACATCCGCCGGATCGTCGGTCTCGCGTGGCCGGTGCTGGTCGGCCAGCTCGCGATCATCGCGTTCGGC GTGATCGACACCGCGATGGT
Product: glycosyltransferase
Products: NA
Alternate protein names: Transmembrane Protein; Glycosyl Transferase Family Protein; Glycosyltransferase; Inner Membrane Protein; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family; Glycosyl Transferase Family
Number of amino acids: Translated: 610; Mature: 609
Protein sequence:
>610_residues MPDARNRLDRAHPRRPPAHNKSLICMKPVVRLTASATRALPRWLLLTLCFVYAAFGLFGRDPWKNEDAAGFGVMWTMAKG GWHDWLLPNLVGKFITTDGPLGYWLGALSIRGLGPWVDASNASRVDTGVLFCVACAFVWYAAYLLGRRAEVQPFKYAFGG EPEPRDYGRTLADGALLVLVACFGLAERGHETTPQLAQFAWIAMLVYGIVRGIDKPLQGALWWGLAIGLVALSGNPVLVV ALLAGTAALWLVTPEMRNLRLPLVGVPLAAAIFALWPLAAFVAAPDDAAWFFNQWIHGSLMRFSGPPTAVLGYAAKNLPL FTWPAWPLAIWAWWSWAGMRRRAHIAIPLSVAVPLVALVILQSQQSNRMYMLLLPPLAVLATFALPTLKRGAINAIDWFA VLSFTILGTFVWLVWLASLTGFPHPLARNLARLVPGYEPHFKILSFICAVIVTVCWCFLARWRVSRQPKVLWRSVVLSSA GTTLMWVLLMTLWLPIVNYGRTYRDVAQQIAVHLPSDYECISPVRLGDAQIATFAYFGNMRFDFSGDCDVILRQDRADFG EPSAMSQYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRRQAAD
Sequences:
>Translated_610_residues MPDARNRLDRAHPRRPPAHNKSLICMKPVVRLTASATRALPRWLLLTLCFVYAAFGLFGRDPWKNEDAAGFGVMWTMAKG GWHDWLLPNLVGKFITTDGPLGYWLGALSIRGLGPWVDASNASRVDTGVLFCVACAFVWYAAYLLGRRAEVQPFKYAFGG EPEPRDYGRTLADGALLVLVACFGLAERGHETTPQLAQFAWIAMLVYGIVRGIDKPLQGALWWGLAIGLVALSGNPVLVV ALLAGTAALWLVTPEMRNLRLPLVGVPLAAAIFALWPLAAFVAAPDDAAWFFNQWIHGSLMRFSGPPTAVLGYAAKNLPL FTWPAWPLAIWAWWSWAGMRRRAHIAIPLSVAVPLVALVILQSQQSNRMYMLLLPPLAVLATFALPTLKRGAINAIDWFA VLSFTILGTFVWLVWLASLTGFPHPLARNLARLVPGYEPHFKILSFICAVIVTVCWCFLARWRVSRQPKVLWRSVVLSSA GTTLMWVLLMTLWLPIVNYGRTYRDVAQQIAVHLPSDYECISPVRLGDAQIATFAYFGNMRFDFSGDCDVILRQDRADFG EPSAMSQYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRRQAAD >Mature_609_residues PDARNRLDRAHPRRPPAHNKSLICMKPVVRLTASATRALPRWLLLTLCFVYAAFGLFGRDPWKNEDAAGFGVMWTMAKGG WHDWLLPNLVGKFITTDGPLGYWLGALSIRGLGPWVDASNASRVDTGVLFCVACAFVWYAAYLLGRRAEVQPFKYAFGGE PEPRDYGRTLADGALLVLVACFGLAERGHETTPQLAQFAWIAMLVYGIVRGIDKPLQGALWWGLAIGLVALSGNPVLVVA LLAGTAALWLVTPEMRNLRLPLVGVPLAAAIFALWPLAAFVAAPDDAAWFFNQWIHGSLMRFSGPPTAVLGYAAKNLPLF TWPAWPLAIWAWWSWAGMRRRAHIAIPLSVAVPLVALVILQSQQSNRMYMLLLPPLAVLATFALPTLKRGAINAIDWFAV LSFTILGTFVWLVWLASLTGFPHPLARNLARLVPGYEPHFKILSFICAVIVTVCWCFLARWRVSRQPKVLWRSVVLSSAG TTLMWVLLMTLWLPIVNYGRTYRDVAQQIAVHLPSDYECISPVRLGDAQIATFAYFGNMRFDFSGDCDVILRQDRADFGE PSAMSQYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRRQAAD
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68347; Mature: 68216
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDARNRLDRAHPRRPPAHNKSLICMKPVVRLTASATRALPRWLLLTLCFVYAAFGLFGR CCCHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPWKNEDAAGFGVMWTMAKGGWHDWLLPNLVGKFITTDGPLGYWLGALSIRGLGPWVDAS CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC NASRVDTGVLFCVACAFVWYAAYLLGRRAEVQPFKYAFGGEPEPRDYGRTLADGALLVLV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH ACFGLAERGHETTPQLAQFAWIAMLVYGIVRGIDKPLQGALWWGLAIGLVALSGNPVLVV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEH ALLAGTAALWLVTPEMRNLRLPLVGVPLAAAIFALWPLAAFVAAPDDAAWFFNQWIHGSL HHHHCCCEEEEECCHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH MRFSGPPTAVLGYAAKNLPLFTWPAWPLAIWAWWSWAGMRRRAHIAIPLSVAVPLVALVI HCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH LQSQQSNRMYMLLLPPLAVLATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLT HHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GFPHPLARNLARLVPGYEPHFKILSFICAVIVTVCWCFLARWRVSRQPKVLWRSVVLSSA CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GTTLMWVLLMTLWLPIVNYGRTYRDVAQQIAVHLPSDYECISPVRLGDAQIATFAYFGNM CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEEECCE RFDFSGDCDVILRQDRADFGEPSAMSQYVWRLVWEGRRVADRDERFRLYERIERPKTPVK EECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC RRPPRRQAAD CCCCCCCCCC >Mature Secondary Structure PDARNRLDRAHPRRPPAHNKSLICMKPVVRLTASATRALPRWLLLTLCFVYAAFGLFGR CCHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DPWKNEDAAGFGVMWTMAKGGWHDWLLPNLVGKFITTDGPLGYWLGALSIRGLGPWVDAS CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCC NASRVDTGVLFCVACAFVWYAAYLLGRRAEVQPFKYAFGGEPEPRDYGRTLADGALLVLV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHH ACFGLAERGHETTPQLAQFAWIAMLVYGIVRGIDKPLQGALWWGLAIGLVALSGNPVLVV HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEH ALLAGTAALWLVTPEMRNLRLPLVGVPLAAAIFALWPLAAFVAAPDDAAWFFNQWIHGSL HHHHCCCEEEEECCHHHCCCCCEECHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCH MRFSGPPTAVLGYAAKNLPLFTWPAWPLAIWAWWSWAGMRRRAHIAIPLSVAVPLVALVI HCCCCCCHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHH LQSQQSNRMYMLLLPPLAVLATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLT HHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC GFPHPLARNLARLVPGYEPHFKILSFICAVIVTVCWCFLARWRVSRQPKVLWRSVVLSSA CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC GTTLMWVLLMTLWLPIVNYGRTYRDVAQQIAVHLPSDYECISPVRLGDAQIATFAYFGNM CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHEEEECCE RFDFSGDCDVILRQDRADFGEPSAMSQYVWRLVWEGRRVADRDERFRLYERIERPKTPVK EECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC RRPPRRQAAD CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA