Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yfgM [C]

Identifier: 116689831

GI number: 116689831

Start: 2011603

End: 2012232

Strand: Reverse

Name: yfgM [C]

Synonym: Bcen2424_1810

Alternate gene names: 116689831

Gene position: 2012232-2011603 (Counterclockwise)

Preceding gene: 116689832

Following gene: 116689830

Centisome position: 57.76

GC content: 66.83

Gene sequence:

>630_bases
ATGAGTTATCACGACGAACAAGAATCGATTGAAAGTCTCAAGGCGTGGTGGGCCCGCTGGGGCAACCTCACCACGTGGAT
CGTGCTCGCGGCGCTCGTCGTCGCGGCCGGTTTCAACGGCTGGAACTACTGGCAGCGCCGTCAGGCCGCCGAGGCGTCCG
GGCTGTACGAGCAGGTCCAGAAGGCTGCCGCCGCGAACGACAAGGCAACGATGGCTCGCGCGGCTGCCGACATGGAAGAC
AAGTTCGGCAGCACGCCGTATGCGCAGATGACGGCGCTCGCGGCCGCGAAGACGCTGTATGCGGCCGGCGACGCGGCAGG
CGCGAAGGCGCAGCTGCAATGGACCGTCGATCACGCCAAGGACGACGAGTACAAGCAGATCGCGAAGCTGCGTCTCGCGT
CGCTGCTGCTCGACGAGAAGGCGTACGATGCGGGCCTCGCGCTGCTGTCGGGTACGCCGGTCGATGCATTCAAGGGCCTC
GTGGCCGATCGTCGCGGCGATCTGCTTGCCGCGCAAGGCAAGACCGACGACGCGCGCGCGGCTTACAAGCTCGCGCTCGA
CGGCCTGTCGAAGGACGACCAGTCCGCGCGCCAGCTCGTGCAGTTCAAGCTGGACGCGCTCGGCGGCTGA

Upstream 100 bases:

>100_bases
ATCAATGCGATGGTTGCATCCGCCGAAGACGGCGACGACTGATCGCGCTGGCATCCGCTCGACAAGAAAAGCCTGAACAG
GAAGAAGGAATCGCTCGCCG

Downstream 100 bases:

>100_bases
ATTCAGGTCCCCTCAACCTCTTAACTCTGCTTCGCTAACCGATGAATTTGCTGAAACGTTACGCTGTGCCCGTTGCCTGC
GCGGCGGCTGTCCTCGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSYHDEQESIESLKAWWARWGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKAAAANDKATMARAAADMED
KFGSTPYAQMTALAAAKTLYAAGDAAGAKAQLQWTVDHAKDDEYKQIAKLRLASLLLDEKAYDAGLALLSGTPVDAFKGL
VADRRGDLLAAQGKTDDARAAYKLALDGLSKDDQSARQLVQFKLDALGG

Sequences:

>Translated_209_residues
MSYHDEQESIESLKAWWARWGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKAAAANDKATMARAAADMED
KFGSTPYAQMTALAAAKTLYAAGDAAGAKAQLQWTVDHAKDDEYKQIAKLRLASLLLDEKAYDAGLALLSGTPVDAFKGL
VADRRGDLLAAQGKTDDARAAYKLALDGLSKDDQSARQLVQFKLDALGG
>Mature_208_residues
SYHDEQESIESLKAWWARWGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQKAAAANDKATMARAAADMEDK
FGSTPYAQMTALAAAKTLYAAGDAAGAKAQLQWTVDHAKDDEYKQIAKLRLASLLLDEKAYDAGLALLSGTPVDAFKGLV
ADRRGDLLAAQGKTDDARAAYKLALDGLSKDDQSARQLVQFKLDALGG

Specific function: Unknown

COG id: COG2976

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018704
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF09976 DUF2133 [H]

EC number: NA

Molecular weight: Translated: 22588; Mature: 22457

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYHDEQESIESLKAWWARWGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQ
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KAAAANDKATMARAAADMEDKFGSTPYAQMTALAAAKTLYAAGDAAGAKAQLQWTVDHAK
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
DDEYKQIAKLRLASLLLDEKAYDAGLALLSGTPVDAFKGLVADRRGDLLAAQGKTDDARA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHH
AYKLALDGLSKDDQSARQLVQFKLDALGG
HHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SYHDEQESIESLKAWWARWGNLTTWIVLAALVVAAGFNGWNYWQRRQAAEASGLYEQVQ
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
KAAAANDKATMARAAADMEDKFGSTPYAQMTALAAAKTLYAAGDAAGAKAQLQWTVDHAK
HHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCC
DDEYKQIAKLRLASLLLDEKAYDAGLALLSGTPVDAFKGLVADRRGDLLAAQGKTDDARA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHH
AYKLALDGLSKDDQSARQLVQFKLDALGG
HHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10655208 [H]