Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689824
Identifier: 116689824
GI number: 116689824
Start: 2004626
End: 2004817
Strand: Reverse
Name: 116689824
Synonym: Bcen2424_1803
Alternate gene names: NA
Gene position: 2004817-2004626 (Counterclockwise)
Preceding gene: 116689825
Following gene: 116689823
Centisome position: 57.55
GC content: 63.54
Gene sequence:
>192_bases ATGGACCTGGCTGGCTCGTTGTTGCTCGCAGTAGCGCTGATGCTGATCATCGAGGGGGCGTTCCCCTTCGTGTTTCCCGT CGCCTGGCGCGACACGTTTCGTAGAATAGCCGAGCGGCCGCCGCATCATATCCGGATCGGCGGGCTGATCGTGATGGTGC TCGGGCTCGTGCTGCTGCTGCTCGCGACCTGA
Upstream 100 bases:
>100_bases CCGCTTCATGCGCAGCCCGACGGGCGGTGCCGCACCGGCGGCGCCTGCTCCCCGCAAACATTGACCTTGGGGCGCCGCGT CGAGCGGCGCCGTCGCTCGC
Downstream 100 bases:
>100_bases CGGAGCCCCGATCCGGACGGCGCATCCGCCGTTCGTTCCGCCCGATTTCGAAGTTCCGATTCAACTCGCGGCGCGCGTGT CGCGCGCCGTTTCCCGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MDLAGSLLLAVALMLIIEGAFPFVFPVAWRDTFRRIAERPPHHIRIGGLIVMVLGLVLLLLAT
Sequences:
>Translated_63_residues MDLAGSLLLAVALMLIIEGAFPFVFPVAWRDTFRRIAERPPHHIRIGGLIVMVLGLVLLLLAT >Mature_63_residues MDLAGSLLLAVALMLIIEGAFPFVFPVAWRDTFRRIAERPPHHIRIGGLIVMVLGLVLLLLAT
Specific function: Unknown
COG id: COG3242
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6936; Mature: 6936
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLAGSLLLAVALMLIIEGAFPFVFPVAWRDTFRRIAERPPHHIRIGGLIVMVLGLVLLL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH LAT HCC >Mature Secondary Structure MDLAGSLLLAVALMLIIEGAFPFVFPVAWRDTFRRIAERPPHHIRIGGLIVMVLGLVLLL CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH LAT HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA