Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is serB [C]

Identifier: 116689799

GI number: 116689799

Start: 1976047

End: 1976997

Strand: Direct

Name: serB [C]

Synonym: Bcen2424_1778

Alternate gene names: 116689799

Gene position: 1976047-1976997 (Clockwise)

Preceding gene: 116689798

Following gene: 116689804

Centisome position: 56.72

GC content: 67.3

Gene sequence:

>951_bases
ATGGCGCGTTCGCGACGCAACGGCCCGCAGCCGCACGGGGCCCGCGTTCGCAGGCGGCCGCCCGCGGGCCGAGCACGTCA
TTCATTCGCCTCCCAACCACTCGTCATGACCCACAATCTCGTCATCCAGAGTCTTGCGCCGCTGTCGGACGCCCATCACA
AACCGCTGCTCGCGCTGTCGCGCGGCACCCGCGTCGTGCAGACCGACGATCACGCGCTGCGGATCGAAAACGCGAGCCCG
GCGCAGCGCCTCGACATCGACGCATACTGCGGCACGCATGCGCTCGATTTCGGCTTCGTCGAGGCCGGCCTCACGCTCGG
CGATTTCGGGCTCGCTGTGATGGACATGGATTCGACGCTGATCACGATCGAGTGCATCGACGAGATCGCCGATTTCTGCG
GATTGAAAACGCAGGTCGCGGAGATCACCGAAGCGTCGATGCGCGGCGAGATCCGCGATTTCAACGAAAGCCTGACGCGC
CGCGTCGCGCTGCTGGCCGGGCTCGACGCGCACGCGCTCGAGCGCGTGTACGAAGAACGGCTGCAACTGTCGCCAGGCGC
CGAGACGATGCTGGCGGGCGTAAAGGCCGCCGGCATGAAGACGCTGCTCGTGTCGGGCGGCTTCACGTTCTTCACCGAGC
GGCTGAAAGCCCGCCTCGGCCTCGACTACGCGCATGCGAACACGCTCGAGATCGTCGACGGCAAGCTCACCGGCAAGGTG
CTCGGCGAGATCGTCAACGCCGACGTAAAGGCGCGCCTGCTGCGCGAGACGTGCGCTTCGCTCGGCCTCGAACCGCGCCG
CGCGATCGCGATGGGCGACGGCTCGAACGACCTGAAGATGATGGCCGAAGCCGGGCTGTCGGTCGCGTTCCACGCGAAGC
CCGTCGTGCGCGATGCGGCCACCGTCGCGTTCGACCATGTCGGCCTCGACGGGCTGCTGCGACTGTTCTGA

Upstream 100 bases:

>100_bases
CGGCGATCCGCCGTACTGGGATCGTGCAAACGGCTGACCACTACCGCCGCGCGCCCGGTTTCGCGCCGGCGCCGGCGCCC
TGCGCGGCCAACCGGCTACA

Downstream 100 bases:

>100_bases
TCCTGCGGCACCCTCAATGAAAAACGCCGGCGCGATATCGCATCGCGCCGGCGTTTTGCTTTTGTGCCGGACGTTGCCGG
CCCGCGATCAGCCCAGCGCG

Product: phosphoserine phosphatase SerB

Products: NA

Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MARSRRNGPQPHGARVRRRPPAGRARHSFASQPLVMTHNLVIQSLAPLSDAHHKPLLALSRGTRVVQTDDHALRIENASP
AQRLDIDAYCGTHALDFGFVEAGLTLGDFGLAVMDMDSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTR
RVALLAGLDAHALERVYEERLQLSPGAETMLAGVKAAGMKTLLVSGGFTFFTERLKARLGLDYAHANTLEIVDGKLTGKV
LGEIVNADVKARLLRETCASLGLEPRRAIAMGDGSNDLKMMAEAGLSVAFHAKPVVRDAATVAFDHVGLDGLLRLF

Sequences:

>Translated_316_residues
MARSRRNGPQPHGARVRRRPPAGRARHSFASQPLVMTHNLVIQSLAPLSDAHHKPLLALSRGTRVVQTDDHALRIENASP
AQRLDIDAYCGTHALDFGFVEAGLTLGDFGLAVMDMDSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTR
RVALLAGLDAHALERVYEERLQLSPGAETMLAGVKAAGMKTLLVSGGFTFFTERLKARLGLDYAHANTLEIVDGKLTGKV
LGEIVNADVKARLLRETCASLGLEPRRAIAMGDGSNDLKMMAEAGLSVAFHAKPVVRDAATVAFDHVGLDGLLRLF
>Mature_315_residues
ARSRRNGPQPHGARVRRRPPAGRARHSFASQPLVMTHNLVIQSLAPLSDAHHKPLLALSRGTRVVQTDDHALRIENASPA
QRLDIDAYCGTHALDFGFVEAGLTLGDFGLAVMDMDSTLITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTRR
VALLAGLDAHALERVYEERLQLSPGAETMLAGVKAAGMKTLLVSGGFTFFTERLKARLGLDYAHANTLEIVDGKLTGKVL
GEIVNADVKARLLRETCASLGLEPRRAIAMGDGSNDLKMMAEAGLSVAFHAKPVVRDAATVAFDHVGLDGLLRLF

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ACT domain [H]

Homologues:

Organism=Homo sapiens, GI46249388, Length=184, Percent_Identity=27.1739130434783, Blast_Score=66, Evalue=4e-11,
Organism=Escherichia coli, GI1790849, Length=204, Percent_Identity=48.5294117647059, Blast_Score=178, Evalue=5e-46,
Organism=Saccharomyces cerevisiae, GI6321647, Length=207, Percent_Identity=40.0966183574879, Blast_Score=142, Evalue=6e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002912
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR023190
- InterPro:   IPR004469 [H]

Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]

EC number: =3.1.3.3 [H]

Molecular weight: Translated: 34171; Mature: 34040

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSRRNGPQPHGARVRRRPPAGRARHSFASQPLVMTHNLVIQSLAPLSDAHHKPLLALS
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEC
RGTRVVQTDDHALRIENASPAQRLDIDAYCGTHALDFGFVEAGLTLGDFGLAVMDMDSTL
CCCEEEEECCCEEEECCCCCHHHCCCHHHCCCHHHHHHHHHCCCEECCCCEEEEECCCCE
ITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTRRVALLAGLDAHALERVYEER
EEHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LQLSPGAETMLAGVKAAGMKTLLVSGGFTFFTERLKARLGLDYAHANTLEIVDGKLTGKV
HCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCHHCCCEEEEECCCHHHHH
LGEIVNADVKARLLRETCASLGLEPRRAIAMGDGSNDLKMMAEAGLSVAFHAKPVVRDAA
HHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHH
TVAFDHVGLDGLLRLF
HHHHHHCCHHHHHHCC
>Mature Secondary Structure 
ARSRRNGPQPHGARVRRRPPAGRARHSFASQPLVMTHNLVIQSLAPLSDAHHKPLLALS
CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEC
RGTRVVQTDDHALRIENASPAQRLDIDAYCGTHALDFGFVEAGLTLGDFGLAVMDMDSTL
CCCEEEEECCCEEEECCCCCHHHCCCHHHCCCHHHHHHHHHCCCEECCCCEEEEECCCCE
ITIECIDEIADFCGLKTQVAEITEASMRGEIRDFNESLTRRVALLAGLDAHALERVYEER
EEHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LQLSPGAETMLAGVKAAGMKTLLVSGGFTFFTERLKARLGLDYAHANTLEIVDGKLTGKV
HCCCCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCHHCCCEEEEECCCHHHHH
LGEIVNADVKARLLRETCASLGLEPRRAIAMGDGSNDLKMMAEAGLSVAFHAKPVVRDAA
HHHHHCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHCCCEEEEECCHHHHHHH
TVAFDHVGLDGLLRLF
HHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]