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The map label for this gene is ynfJ [C]

Identifier: 116689758

GI number: 116689758

Start: 1928838

End: 1930607

Strand: Direct

Name: ynfJ [C]

Synonym: Bcen2424_1737

Alternate gene names: 116689758

Gene position: 1928838-1930607 (Clockwise)

Preceding gene: 116689757

Following gene: 116689760

Centisome position: 55.36

GC content: 68.47

Gene sequence:

>1770_bases
ATGCTTCGCGTCGTTTTCCATCGCCCCCTTTCAGCCGTGCTCTCGTTCCTGCTGAAGCTGCGCACTCGCGCCCGAACGCT
GTTCCGCCTGTCGGACGCCCATACGATGCTGATCTGGTCGGCCATCGTCGGCGTCGGTGGCGCCTTTGCCACGATGGCGT
TCCGCGAAGGCATCGACCTGATGCAGCGGCTGATCTCGGGGCACAGCGGCAGCTTCGTGCAGATGGCGAAGAGCCTGCCG
TGGTACCTGCGGTTCTGGATGCCGGCCGCGGGTGGCTTCCTCGCCGGCTGCGTGCTGCTGCTCGCGACGCGCGGCGACAA
GGACGCCGCCAAGACCGACTACATGGAGTCGGTCGCGCTCGGCAACGGCGTCGTGCCGGTACGGCAGAGCCTGTGGCGCA
GCGTGTCGTCGCTGCTGACGATCGGCAGCGGCGGCTCGATCGGCCGCGAAGGCCCGATGGTGCAGCTTGCGGCGCTCGCC
GCGTCGCTCGTCGGCCGCTTCGCGCACTTCGACCCGCCGCGCCTGCGCCTGCTGGTCGCGTGCGGGGCGGCGGCCGGCAT
CACGTCCGCGTACAACGCGCCGATCGCCGGCGCCTTTTTCGTGTCGGAAATCGTGCTCGGCACGATCGCGATGGAGAGCT
TCGGGCCGATGGTCGTCGCGTCGGTCGTCGCAAACATCGTGATGCGCGAATTCGCCGGCTACCGGCCGCCGTACGAGATG
CCCGTGTTTCCCGCCGTGACCGGCCCCGAGGTGCTGCCGTTCGTCGTGCTCGGCGCGCTGTGCGGCGTGCTCGCGCCGCA
GTTCCTGCACCTGCTCGACGCATCGAAGACGCAGTTCAAGCGGCTGCCGGTGCCGTTGCCCGTGCGGCTCGCGCTCGGCG
GCCTCGTCGTCGGCGTGATCTCGGTGTGGATTCCGGACGTGTGGGGCAACGGCTACAGCGTCGTGAACCACATCCTCCAT
GCGCCGTGGACCTGGCAGGCGCTCGTCGCGGTCCTCGTGTTCAAGGTGATCGCGACCGCCGCGACCGCCGGCTCGGGCGC
GATCGGCGGCGTGTTCACGCCGACGCTGTTCGTCGGCGCCGTGTTCGGCTCGCTGTTCGGGCTCGCGATGGACGCGCTGT
GGCCCGGCCATACGTCCGCGTATTTCGCGTACGCGATCGTCGGGATGGGCGCGTTCATGGCGGGCGCCACGCAGGCGCCG
CTGATGGCGATCCTGATGATCTTCGAGATGACGCTGAGCTATCAGGTCGTGCTGCCGCTGCTGGTGTCGTGCGTATTCGC
GTATTTCGTCGCGCGCGCGACGGGCACCACGTCGATGTATGAAATCACGCAGCACCACTACCAGGACGCGCAGGAGCGGC
AGCGGCTGCGCACCACGCAGATGCGCGAGCTGATCCAGCCTGCGCAGACGGTCGTGCCGCTCACCGCGAGCGTCGCCGAC
ATGACGCGCGTGTTTCTCGAATATCCGGTGAAGTATCTGTACGTGACCGACGACGCCGGGCGCTTTCGCGGCGCGGTCGC
GTTGAAGGACATCACGTCCGATTTGCTCGACAAGCGCGACACGACCGACAAGACGGCCGCGCACTACGCGCACACGCCGT
TTCCGCTGCTCACGCCCGACATGCCGCTCGCGACCGCGCTCCAGCGCTTCATGGCGTTCCAGGGCGAACGCCTGCCGGTG
ATCGAGAGCGAAGCCGAGCCGACGCTCGCGGGCGTGGTCTACAAGACGTCGCTGCTCGACGCGTACCGGCGGATGACCGG
CGAACGCTGA

Upstream 100 bases:

>100_bases
GTGCAGCACTGGCTTGGCTGAGCCGCACGTCCGCGACGGTTCGCGCGCCGCGCCCGACGGGAAGCCCCACGAGGCGGTCC
CGCGGGCGCGGCGCAGTGCT

Downstream 100 bases:

>100_bases
CGCGCGTCGCCGCACCACTCGCACCGCCCGCGCCGGTCAGTCCGGCGCACGCCCCAGCACGACCCGCGCGAAGAACCCGC
CAAGCACCGACTCGGCCACG

Product: putative voltage-gated ClC-type chloride channel ClcB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MLRVVFHRPLSAVLSFLLKLRTRARTLFRLSDAHTMLIWSAIVGVGGAFATMAFREGIDLMQRLISGHSGSFVQMAKSLP
WYLRFWMPAAGGFLAGCVLLLATRGDKDAAKTDYMESVALGNGVVPVRQSLWRSVSSLLTIGSGGSIGREGPMVQLAALA
ASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVSEIVLGTIAMESFGPMVVASVVANIVMREFAGYRPPYEM
PVFPAVTGPEVLPFVVLGALCGVLAPQFLHLLDASKTQFKRLPVPLPVRLALGGLVVGVISVWIPDVWGNGYSVVNHILH
APWTWQALVAVLVFKVIATAATAGSGAIGGVFTPTLFVGAVFGSLFGLAMDALWPGHTSAYFAYAIVGMGAFMAGATQAP
LMAILMIFEMTLSYQVVLPLLVSCVFAYFVARATGTTSMYEITQHHYQDAQERQRLRTTQMRELIQPAQTVVPLTASVAD
MTRVFLEYPVKYLYVTDDAGRFRGAVALKDITSDLLDKRDTTDKTAAHYAHTPFPLLTPDMPLATALQRFMAFQGERLPV
IESEAEPTLAGVVYKTSLLDAYRRMTGER

Sequences:

>Translated_589_residues
MLRVVFHRPLSAVLSFLLKLRTRARTLFRLSDAHTMLIWSAIVGVGGAFATMAFREGIDLMQRLISGHSGSFVQMAKSLP
WYLRFWMPAAGGFLAGCVLLLATRGDKDAAKTDYMESVALGNGVVPVRQSLWRSVSSLLTIGSGGSIGREGPMVQLAALA
ASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVSEIVLGTIAMESFGPMVVASVVANIVMREFAGYRPPYEM
PVFPAVTGPEVLPFVVLGALCGVLAPQFLHLLDASKTQFKRLPVPLPVRLALGGLVVGVISVWIPDVWGNGYSVVNHILH
APWTWQALVAVLVFKVIATAATAGSGAIGGVFTPTLFVGAVFGSLFGLAMDALWPGHTSAYFAYAIVGMGAFMAGATQAP
LMAILMIFEMTLSYQVVLPLLVSCVFAYFVARATGTTSMYEITQHHYQDAQERQRLRTTQMRELIQPAQTVVPLTASVAD
MTRVFLEYPVKYLYVTDDAGRFRGAVALKDITSDLLDKRDTTDKTAAHYAHTPFPLLTPDMPLATALQRFMAFQGERLPV
IESEAEPTLAGVVYKTSLLDAYRRMTGER
>Mature_589_residues
MLRVVFHRPLSAVLSFLLKLRTRARTLFRLSDAHTMLIWSAIVGVGGAFATMAFREGIDLMQRLISGHSGSFVQMAKSLP
WYLRFWMPAAGGFLAGCVLLLATRGDKDAAKTDYMESVALGNGVVPVRQSLWRSVSSLLTIGSGGSIGREGPMVQLAALA
ASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVSEIVLGTIAMESFGPMVVASVVANIVMREFAGYRPPYEM
PVFPAVTGPEVLPFVVLGALCGVLAPQFLHLLDASKTQFKRLPVPLPVRLALGGLVVGVISVWIPDVWGNGYSVVNHILH
APWTWQALVAVLVFKVIATAATAGSGAIGGVFTPTLFVGAVFGSLFGLAMDALWPGHTSAYFAYAIVGMGAFMAGATQAP
LMAILMIFEMTLSYQVVLPLLVSCVFAYFVARATGTTSMYEITQHHYQDAQERQRLRTTQMRELIQPAQTVVPLTASVAD
MTRVFLEYPVKYLYVTDDAGRFRGAVALKDITSDLLDKRDTTDKTAAHYAHTPFPLLTPDMPLATALQRFMAFQGERLPV
IESEAEPTLAGVVYKTSLLDAYRRMTGER

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Homo sapiens, GI55770838, Length=489, Percent_Identity=22.9038854805726, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI55770840, Length=489, Percent_Identity=22.9038854805726, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI153252026, Length=501, Percent_Identity=23.75249500998, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI87081943, Length=424, Percent_Identity=38.2075471698113, Blast_Score=203, Evalue=3e-53,
Organism=Escherichia coli, GI1786350, Length=320, Percent_Identity=27.5, Blast_Score=96, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 63651; Mature: 63651

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]