Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

Click here to switch to the map view.

The map label for this gene is 116689735

Identifier: 116689735

GI number: 116689735

Start: 1908162

End: 1909352

Strand: Reverse

Name: 116689735

Synonym: Bcen2424_1713

Alternate gene names: NA

Gene position: 1909352-1908162 (Counterclockwise)

Preceding gene: 116689736

Following gene: 116689734

Centisome position: 54.8

GC content: 69.86

Gene sequence:

>1191_bases
ATGAACCAGCAACGATGGAAACGGATGGTGGCGCTGACGGCGCTCGGTGCGGCCTGCGCGCTCGGCCGGCCGGCGTGGGC
TGCCGACGCGTTGCGGCCTGATGTGGCGAAGCCGCTGGCGGCGGCGCAGGAGCTGTATCGCGCGCACAAGTATCGCGACG
CGCTCGGCAAGATCGCGCAGGCGGCCGCCGTGCCCAACCGCACGCCGTATGAAACCTACATGGTGGAGGCGACGCGCGGC
GCGGCGGCGATGGCGGCCGGCGATACCGGCGTGGCCGCGCAGGCCTACGAAACCGTCCTGAACTCGGGGCGCCTGTCGGG
CGAGGACGAACAGCGGACGACGGCGGCGCTCGCGGGGATCTACTTCCAGCAGAAGAACTATCCGCAGGCGATCCGCGTCG
CGCAGCGCTACCTGAAGGCGGGCGGCACGGACCCGGAAATGCGCACGCTGCTTACGCAGTCGTATTACCTGTCGAACGAT
TGCGGCCAGGTCGTGAGCCAGTTGAAGGCCAGCGCGGACGCACAGGTGAAGGCCGGCCACGCGCCGGACGAAGGGCAGTT
GCAGATGCTGGCGACCTGCGCGCAAAAGAGCAAGGATGCCGGCGCCTATCGCAGCGCGCTCGCCATGCTGGTGGCTTATC
ACCCGAGCCCCGCGTACTGGGAGGAAATGGTCTCGGCGATTCGCGGCAGCCCCGGTTACCTGTCGTCGCTCGACCTCGAC
ATCTACCGGTTGCGCCGGGTGACGGGCTCGCTGACGACGGCAGACGCCTATATGGAGATGACGCAGCTCGCGCTGGTGGC
GGGCACGCCGGCCGAAGGACGGCAGGTGATCGACCAGGGGTTTGCGTCCGGCGTGCTGGGCAAGGATGCGCAGGCGGACC
GCGAGAAACGGCTGCGGGCGCTGGCCGACAAGCGCGCACAGTCAGGCGCGGACGCTGCCGATCCGGTGGCGCCGATCGAC
GCGGGCATGAATCTGGTGTTCGCGGGCCACACGGCGCAGGGGCTGTCGATGATGGAGCAGGCGATCGCGAAGGGCGGGCT
CGAGCATCCCGATGCGGCGCGGCTGCGGCTCGGCGAGGCGTACTACGTGGCGGGCCAGAAGGCGCACGCGGTCCAGGTGC
TGCGGACGGTGAAGGGCGCCGACGGATCGGGGGATCTGGCGAAGCTCTGGACGGTCGTGGCGTCGCGGTAG

Upstream 100 bases:

>100_bases
GACGTGGCGGCCGTCCTGGCGTCCGCGCAGCGCGTGGGCGCGACGAAGATCGGCCTGGTCGGCAACGAGCAGTTCATGCA
ATGACGGGACAGGCCAACCG

Downstream 100 bases:

>100_bases
CGCAACGCAAGAGCGCGACGGCGTGTGACGCGCACGCGATCGACAAGCAGCGTGACGCGGCGGAAATGCAAGTGCTTGAC
GGTCAGGCATGAAGAGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MNQQRWKRMVALTALGAACALGRPAWAADALRPDVAKPLAAAQELYRAHKYRDALGKIAQAAAVPNRTPYETYMVEATRG
AAAMAAGDTGVAAQAYETVLNSGRLSGEDEQRTTAALAGIYFQQKNYPQAIRVAQRYLKAGGTDPEMRTLLTQSYYLSND
CGQVVSQLKASADAQVKAGHAPDEGQLQMLATCAQKSKDAGAYRSALAMLVAYHPSPAYWEEMVSAIRGSPGYLSSLDLD
IYRLRRVTGSLTTADAYMEMTQLALVAGTPAEGRQVIDQGFASGVLGKDAQADREKRLRALADKRAQSGADAADPVAPID
AGMNLVFAGHTAQGLSMMEQAIAKGGLEHPDAARLRLGEAYYVAGQKAHAVQVLRTVKGADGSGDLAKLWTVVASR

Sequences:

>Translated_396_residues
MNQQRWKRMVALTALGAACALGRPAWAADALRPDVAKPLAAAQELYRAHKYRDALGKIAQAAAVPNRTPYETYMVEATRG
AAAMAAGDTGVAAQAYETVLNSGRLSGEDEQRTTAALAGIYFQQKNYPQAIRVAQRYLKAGGTDPEMRTLLTQSYYLSND
CGQVVSQLKASADAQVKAGHAPDEGQLQMLATCAQKSKDAGAYRSALAMLVAYHPSPAYWEEMVSAIRGSPGYLSSLDLD
IYRLRRVTGSLTTADAYMEMTQLALVAGTPAEGRQVIDQGFASGVLGKDAQADREKRLRALADKRAQSGADAADPVAPID
AGMNLVFAGHTAQGLSMMEQAIAKGGLEHPDAARLRLGEAYYVAGQKAHAVQVLRTVKGADGSGDLAKLWTVVASR
>Mature_396_residues
MNQQRWKRMVALTALGAACALGRPAWAADALRPDVAKPLAAAQELYRAHKYRDALGKIAQAAAVPNRTPYETYMVEATRG
AAAMAAGDTGVAAQAYETVLNSGRLSGEDEQRTTAALAGIYFQQKNYPQAIRVAQRYLKAGGTDPEMRTLLTQSYYLSND
CGQVVSQLKASADAQVKAGHAPDEGQLQMLATCAQKSKDAGAYRSALAMLVAYHPSPAYWEEMVSAIRGSPGYLSSLDLD
IYRLRRVTGSLTTADAYMEMTQLALVAGTPAEGRQVIDQGFASGVLGKDAQADREKRLRALADKRAQSGADAADPVAPID
AGMNLVFAGHTAQGLSMMEQAIAKGGLEHPDAARLRLGEAYYVAGQKAHAVQVLRTVKGADGSGDLAKLWTVVASR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42122; Mature: 42122

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQQRWKRMVALTALGAACALGRPAWAADALRPDVAKPLAAAQELYRAHKYRDALGKIAQ
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAVPNRTPYETYMVEATRGAAAMAAGDTGVAAQAYETVLNSGRLSGEDEQRTTAALAGI
HHCCCCCCCCHHEEEEECCCCHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
YFQQKNYPQAIRVAQRYLKAGGTDPEMRTLLTQSYYLSNDCGQVVSQLKASADAQVKAGH
HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCC
APDEGQLQMLATCAQKSKDAGAYRSALAMLVAYHPSPAYWEEMVSAIRGSPGYLSSLDLD
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHCCHH
IYRLRRVTGSLTTADAYMEMTQLALVAGTPAEGRQVIDQGFASGVLGKDAQADREKRLRA
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LADKRAQSGADAADPVAPIDAGMNLVFAGHTAQGLSMMEQAIAKGGLEHPDAARLRLGEA
HHHHHHHCCCCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHEECCE
YYVAGQKAHAVQVLRTVKGADGSGDLAKLWTVVASR
EEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNQQRWKRMVALTALGAACALGRPAWAADALRPDVAKPLAAAQELYRAHKYRDALGKIAQ
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAAVPNRTPYETYMVEATRGAAAMAAGDTGVAAQAYETVLNSGRLSGEDEQRTTAALAGI
HHCCCCCCCCHHEEEEECCCCHHEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
YFQQKNYPQAIRVAQRYLKAGGTDPEMRTLLTQSYYLSNDCGQVVSQLKASADAQVKAGH
HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEECCC
APDEGQLQMLATCAQKSKDAGAYRSALAMLVAYHPSPAYWEEMVSAIRGSPGYLSSLDLD
CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHCCHH
IYRLRRVTGSLTTADAYMEMTQLALVAGTPAEGRQVIDQGFASGVLGKDAQADREKRLRA
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
LADKRAQSGADAADPVAPIDAGMNLVFAGHTAQGLSMMEQAIAKGGLEHPDAARLRLGEA
HHHHHHHCCCCCCCCCCHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHEECCE
YYVAGQKAHAVQVLRTVKGADGSGDLAKLWTVVASR
EEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA