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The map label for this gene is ycjC [C]

Identifier: 116689734

GI number: 116689734

Start: 1907284

End: 1907859

Strand: Reverse

Name: ycjC [C]

Synonym: Bcen2424_1712

Alternate gene names: 116689734

Gene position: 1907859-1907284 (Counterclockwise)

Preceding gene: 116689735

Following gene: 116689733

Centisome position: 54.76

GC content: 63.37

Gene sequence:

>576_bases
ATGACTGTGCCCCCTGATGAGTCGGTTCTGGTCGCCGTATCGCTAGGCAACAAGATCCGGGCGCTGCGCCAGCGCCTGAA
GCTCACGCTTGACGAGACGGCCGGGATTGCAGGCATTTCGAAGCCGTTCCTGTCTCAGGTAGAGCGTGGGCGCGCGACGC
CGTCGATCACGTCACTGGTCCGGATCGCGCAAGCGCTGGGCGTGACGATGCAGTACTTCATCGACACGCCGACGGAAGCG
CGTTCGGTGTGCCGCGGGAACGCGATGCAGTATTTCCAGTTCGCGAACTCGGCCAGCCTGTTCGCCAGGCTGACGAACCT
GGTGGATGGTCGAAAGCTCGACGCGATTCTCGTCAGGATGCCGGCGGGGCAGTCGCCGTCCGAGATAACGACACACGCGG
GCGAAGAGTTCGTCTATGTGATGCGCGGGCAGGTCGCACTGACGCTCGAGGATTGCACGTTCACGCTGAACGAGGGCGAT
ACCGCGCACTACGAATCGACGACGCCGCATGCATGGCACAACACGGCCGACGAAGAGGCGGTGATCGTCTGGGTCGGCAC
GCCGAGGCTGTTCTAG

Upstream 100 bases:

>100_bases
GCAGTGCGCGGCCGGGTATCACGCCGTGCCGGTCGCGTCATCGCATCGGCCAGGGATCGCCGATATCAAACCGGTTTCGA
CTGCGAGGCTCCGCACTTCC

Downstream 100 bases:

>100_bases
CGGAGGCGGCAGATGCCGCACGCCGCGATGCCGGAGAATTACCCGTCCGATGGACGGCAGCACGCAGTACGGCGCGCGAA
CGGTTTCGTTGCCGCAGGGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; MerR Family Transcriptional Regulator; Cupin 2 Domain-Containing Protein; Cupin 2 Conserved Barrel Domain Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Transcriptional Regulator MerR Family; Helix-Turn-Helix Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; Regulatory Protein; Helix-Turn-Helix Domain Protein; HTH-Type Transcriptional Regulator; Cupin 2 Conserved Barrel Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; Transcription Regulator; Transcriptional Regulator Merr Family; Transcription Regulator Protein; Transcriptional Regulator Xre Familiy; Helix-Turn-Helix Transcriptional Regulator PuuR; Transcriptional Regulator Cro/CI Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; Cupin Domain Protein; Transcriptional Regulator Xre Family; XRE Family-Like Protein; Transcriptional Regulatory Protein; Epoxidase; Transcriptional Regulator XRE Family Protein; Hth-Type Transcriptional Regulator

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MTVPPDESVLVAVSLGNKIRALRQRLKLTLDETAGIAGISKPFLSQVERGRATPSITSLVRIAQALGVTMQYFIDTPTEA
RSVCRGNAMQYFQFANSASLFARLTNLVDGRKLDAILVRMPAGQSPSEITTHAGEEFVYVMRGQVALTLEDCTFTLNEGD
TAHYESTTPHAWHNTADEEAVIVWVGTPRLF

Sequences:

>Translated_191_residues
MTVPPDESVLVAVSLGNKIRALRQRLKLTLDETAGIAGISKPFLSQVERGRATPSITSLVRIAQALGVTMQYFIDTPTEA
RSVCRGNAMQYFQFANSASLFARLTNLVDGRKLDAILVRMPAGQSPSEITTHAGEEFVYVMRGQVALTLEDCTFTLNEGD
TAHYESTTPHAWHNTADEEAVIVWVGTPRLF
>Mature_190_residues
TVPPDESVLVAVSLGNKIRALRQRLKLTLDETAGIAGISKPFLSQVERGRATPSITSLVRIAQALGVTMQYFIDTPTEAR
SVCRGNAMQYFQFANSASLFARLTNLVDGRKLDAILVRMPAGQSPSEITTHAGEEFVYVMRGQVALTLEDCTFTLNEGDT
AHYESTTPHAWHNTADEEAVIVWVGTPRLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20942; Mature: 20811

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVPPDESVLVAVSLGNKIRALRQRLKLTLDETAGIAGISKPFLSQVERGRATPSITSLV
CCCCCCCCEEEEEECCHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
RIAQALGVTMQYFIDTPTEARSVCRGNAMQYFQFANSASLFARLTNLVDGRKLDAILVRM
HHHHHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEEC
PAGQSPSEITTHAGEEFVYVMRGQVALTLEDCTFTLNEGDTAHYESTTPHAWHNTADEEA
CCCCCCCHHHHCCCCEEEEEEECCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCE
VIVWVGTPRLF
EEEEECCCCCC
>Mature Secondary Structure 
TVPPDESVLVAVSLGNKIRALRQRLKLTLDETAGIAGISKPFLSQVERGRATPSITSLV
CCCCCCCEEEEEECCHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
RIAQALGVTMQYFIDTPTEARSVCRGNAMQYFQFANSASLFARLTNLVDGRKLDAILVRM
HHHHHHCCEEEEEECCCHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHCCCCEEEEEEEC
PAGQSPSEITTHAGEEFVYVMRGQVALTLEDCTFTLNEGDTAHYESTTPHAWHNTADEEA
CCCCCCCHHHHCCCCEEEEEEECCEEEEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCE
VIVWVGTPRLF
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA