Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yejA [C]

Identifier: 116689732

GI number: 116689732

Start: 1901997

End: 1903871

Strand: Reverse

Name: yejA [C]

Synonym: Bcen2424_1710

Alternate gene names: 116689732

Gene position: 1903871-1901997 (Counterclockwise)

Preceding gene: 116689733

Following gene: 116689731

Centisome position: 54.65

GC content: 65.39

Gene sequence:

>1875_bases
ATGAAACTGTTGAAATGGCGATGGGCAGGCGTGCCGCGCGCGGCGCTGTTCGCGTGCGCCGTGCTGCTCGTGTCGGGTAG
CGCCATGCCACGTGCGGCGCTCGCGGTGTCGGCGATCGCGCAATACGACCAGCCCAAGTACCTGGCCAATTTTACGCATT
TCGATTATGCCGATCCCGACGCGCCGAATGACGGCACGCTCAACTTCGAAAACTACGACGAAGCACAGAGCTACGACTCG
CTGAACCCGTTTCTGACCCGCGGCTCGCCCGCGCCGGACATCAAGAACCTGATGTTCGACACGCTGATGCAGCGCAGCTG
GGATGAACTCGCGTCCGAATACGCGCTGATCGCCGACGACGTCGAGGTGGCGGCCGACGGGCTGTCCGCGACGTTCCACA
TCAATCCGGCCGCGCGCTTTTCGAACGGCGACGCAATCACCGCGGCTGACGTCAAGTATTCGTTCGATACGCTGACGAGC
CCGCAGGCGTCGCCGCTGTACAACGCGCAATTCTCGATCATCAAGCGCGCGGTGGTCGTCGACAGCCACACGATCCGCTT
CGAGTTCAAGCACGCGGAGCGCGACGCCGCGCTGATCGCAGGCGACCTGCCGGTGTTCTCGCCGAAGTGGGGGCAGCGCG
CGGACGGTACGCGGCCGCCGTTCGACCAGATCGCGAACGAGCCGCCGATCGCGAGCGGCGCGTACCTGATCGAGCAGCGC
AGGAACGACAAGCAGATCGCGTACGTGCGCAACCCGCACTACTGGGCCGCGAATCTGCCGTCGCGGCGCGGGATGTTCCG
TTTCGCGCGCGTGTCGTTCAAGCTGTACCTCGACCAGTACACGGCGCTCGAGGCGTTCAAGGCCGGCGATGTCGACGCGC
GGATGGAGTACAGCTCGACGCAGTGGGCGCGCAAGTACGTCGGCAAGAATTTCAGCAACGGCATGCTGAAGAAGGGGGAA
TTCCCGGACGGCCCCGCGCAGATGCAGGGCTTCCTGATGAACCTGCGCAAACCGATGTTCCAGGACGTGCGCGTACGGCA
TGCGCTCGCGCTGGCGTTCGACTTCGACTGGATGAGCCGGATGATGTTCTACGGACAGTACCGCCGCACCAACAGCTTCT
GGGACGCGAGCCCGTTCGCCGCGTCCGGCATGCCGAGCGCGAAGGAGCTCGCGCTGCTCGAACCGTACCGCTCGACGCTG
CCGCCGGAGGTGTTCGGGCCGATGGTCAAGCAGCCGTCGACGCTGCCGCCGGGCTCGCTGCGCGCGAACCTCAGGCAAGC
GCGCGACTTGCTCGCGCAGGCCGGCTGGCATTATCGCGACGGCGCGCTGCGCGACGCGAACGGCACGCCGATGACGATCG
AGATCATCGACGACCAGCCCGGCATGGATCGCCTGATCCTGCCGTACACGCAAGCGCTCGCGACGCTCGGCATCCATGCG
TACCTGCACGAGATCGACAGCGCGCTCTACCAGAAGCGGCTCGACAATTTCGAGTACGACATGACGACGTATATCTACTC
GCCCGTGACAATTCCCGGCGCGGAGCTGACGCGCCGTTTCGGCAGCGCGGCTGCCTCGCAGCCCGGCTCGGAGAACTATC
CGGGCGTGAAGTCGAAAGCCGTCGATGCGCTGATCCGCGCGGCGCTCGCGGCGAATACGCTCGACGATCTCGAGACGGCC
ACGCACGCCCTTGATCGCGTGCTGATCAACCTGTACGTACTGGTCCCGCAGTACTACATGCCGAACGCGCGGATCGCGTA
CAAGACGACCCTCGGTCATCCGGCGGTCGTGCCGGCTTCCTATCAGTACGAGGACTGGATCGTCGACTACTGGTACGGGA
AGCGGCCGGCGGTCCAACCCGCTCCGGCGGCCTGA

Upstream 100 bases:

>100_bases
CAGCACGAACAACCAGTGGGATGCAGGTGGCACGCGGCATCCTGCACAGGAATCTACCGCGCGCAGGCATCGCGCCCGCA
CGCTTTCGGACAGACCGACC

Downstream 100 bases:

>100_bases
CGGAGAACAACCATGCTGGCATACATACTCAGGCGCCTGCTGTTGATGATCCCGACGCTGATCGGCGTCGTGACGATCAC
ATTCGCCGTCACGCAGTTCG

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 624; Mature: 624

Protein sequence:

>624_residues
MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPDAPNDGTLNFENYDEAQSYDS
LNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADDVEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTS
PQASPLYNAQFSIIKRAVVVDSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR
RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSSTQWARKYVGKNFSNGMLKKGE
FPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSRMMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTL
PPEVFGPMVKQPSTLPPGSLRANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA
YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKAVDALIRAALAANTLDDLETA
THALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPASYQYEDWIVDYWYGKRPAVQPAPAA

Sequences:

>Translated_624_residues
MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPDAPNDGTLNFENYDEAQSYDS
LNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADDVEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTS
PQASPLYNAQFSIIKRAVVVDSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR
RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSSTQWARKYVGKNFSNGMLKKGE
FPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSRMMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTL
PPEVFGPMVKQPSTLPPGSLRANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA
YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKAVDALIRAALAANTLDDLETA
THALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPASYQYEDWIVDYWYGKRPAVQPAPAA
>Mature_624_residues
MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPDAPNDGTLNFENYDEAQSYDS
LNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADDVEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTS
PQASPLYNAQFSIIKRAVVVDSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR
RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSSTQWARKYVGKNFSNGMLKKGE
FPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSRMMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTL
PPEVFGPMVKQPSTLPPGSLRANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA
YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKAVDALIRAALAANTLDDLETA
THALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPASYQYEDWIVDYWYGKRPAVQPAPAA

Specific function: Unknown

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI87082063, Length=588, Percent_Identity=34.1836734693878, Blast_Score=315, Evalue=8e-87,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 69822; Mature: 69822

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPD
CCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
APNDGTLNFENYDEAQSYDSLNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADD
CCCCCEECCCCCHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC
VEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTSPQASPLYNAQFSIIKRAVVV
HHHHHCCCEEEEEECCHHCCCCCCEEEEEECEEEHHCCCCCCCCCCCCHHHHHHHHHHEE
DSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR
CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHC
RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSST
CCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHH
QWARKYVGKNFSNGMLKKGEFPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSR
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHH
MMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTLPPEVFGPMVKQPSTLPPGSL
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCHHH
RANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA
HHHHHHHHHHHHHCCCEECCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VDALIRAALAANTLDDLETATHALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPAS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCC
YQYEDWIVDYWYGKRPAVQPAPAA
CCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPD
CCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC
APNDGTLNFENYDEAQSYDSLNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADD
CCCCCEECCCCCHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC
VEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTSPQASPLYNAQFSIIKRAVVV
HHHHHCCCEEEEEECCHHCCCCCCEEEEEECEEEHHCCCCCCCCCCCCHHHHHHHHHHEE
DSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR
CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHC
RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSST
CCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHH
QWARKYVGKNFSNGMLKKGEFPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSR
HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHH
MMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTLPPEVFGPMVKQPSTLPPGSL
HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCHHH
RANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA
HHHHHHHHHHHHHCCCEECCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH
YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKA
HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH
VDALIRAALAANTLDDLETATHALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPAS
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCC
YQYEDWIVDYWYGKRPAVQPAPAA
CCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA