Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is yejA [C]
Identifier: 116689732
GI number: 116689732
Start: 1901997
End: 1903871
Strand: Reverse
Name: yejA [C]
Synonym: Bcen2424_1710
Alternate gene names: 116689732
Gene position: 1903871-1901997 (Counterclockwise)
Preceding gene: 116689733
Following gene: 116689731
Centisome position: 54.65
GC content: 65.39
Gene sequence:
>1875_bases ATGAAACTGTTGAAATGGCGATGGGCAGGCGTGCCGCGCGCGGCGCTGTTCGCGTGCGCCGTGCTGCTCGTGTCGGGTAG CGCCATGCCACGTGCGGCGCTCGCGGTGTCGGCGATCGCGCAATACGACCAGCCCAAGTACCTGGCCAATTTTACGCATT TCGATTATGCCGATCCCGACGCGCCGAATGACGGCACGCTCAACTTCGAAAACTACGACGAAGCACAGAGCTACGACTCG CTGAACCCGTTTCTGACCCGCGGCTCGCCCGCGCCGGACATCAAGAACCTGATGTTCGACACGCTGATGCAGCGCAGCTG GGATGAACTCGCGTCCGAATACGCGCTGATCGCCGACGACGTCGAGGTGGCGGCCGACGGGCTGTCCGCGACGTTCCACA TCAATCCGGCCGCGCGCTTTTCGAACGGCGACGCAATCACCGCGGCTGACGTCAAGTATTCGTTCGATACGCTGACGAGC CCGCAGGCGTCGCCGCTGTACAACGCGCAATTCTCGATCATCAAGCGCGCGGTGGTCGTCGACAGCCACACGATCCGCTT CGAGTTCAAGCACGCGGAGCGCGACGCCGCGCTGATCGCAGGCGACCTGCCGGTGTTCTCGCCGAAGTGGGGGCAGCGCG CGGACGGTACGCGGCCGCCGTTCGACCAGATCGCGAACGAGCCGCCGATCGCGAGCGGCGCGTACCTGATCGAGCAGCGC AGGAACGACAAGCAGATCGCGTACGTGCGCAACCCGCACTACTGGGCCGCGAATCTGCCGTCGCGGCGCGGGATGTTCCG TTTCGCGCGCGTGTCGTTCAAGCTGTACCTCGACCAGTACACGGCGCTCGAGGCGTTCAAGGCCGGCGATGTCGACGCGC GGATGGAGTACAGCTCGACGCAGTGGGCGCGCAAGTACGTCGGCAAGAATTTCAGCAACGGCATGCTGAAGAAGGGGGAA TTCCCGGACGGCCCCGCGCAGATGCAGGGCTTCCTGATGAACCTGCGCAAACCGATGTTCCAGGACGTGCGCGTACGGCA TGCGCTCGCGCTGGCGTTCGACTTCGACTGGATGAGCCGGATGATGTTCTACGGACAGTACCGCCGCACCAACAGCTTCT GGGACGCGAGCCCGTTCGCCGCGTCCGGCATGCCGAGCGCGAAGGAGCTCGCGCTGCTCGAACCGTACCGCTCGACGCTG CCGCCGGAGGTGTTCGGGCCGATGGTCAAGCAGCCGTCGACGCTGCCGCCGGGCTCGCTGCGCGCGAACCTCAGGCAAGC GCGCGACTTGCTCGCGCAGGCCGGCTGGCATTATCGCGACGGCGCGCTGCGCGACGCGAACGGCACGCCGATGACGATCG AGATCATCGACGACCAGCCCGGCATGGATCGCCTGATCCTGCCGTACACGCAAGCGCTCGCGACGCTCGGCATCCATGCG TACCTGCACGAGATCGACAGCGCGCTCTACCAGAAGCGGCTCGACAATTTCGAGTACGACATGACGACGTATATCTACTC GCCCGTGACAATTCCCGGCGCGGAGCTGACGCGCCGTTTCGGCAGCGCGGCTGCCTCGCAGCCCGGCTCGGAGAACTATC CGGGCGTGAAGTCGAAAGCCGTCGATGCGCTGATCCGCGCGGCGCTCGCGGCGAATACGCTCGACGATCTCGAGACGGCC ACGCACGCCCTTGATCGCGTGCTGATCAACCTGTACGTACTGGTCCCGCAGTACTACATGCCGAACGCGCGGATCGCGTA CAAGACGACCCTCGGTCATCCGGCGGTCGTGCCGGCTTCCTATCAGTACGAGGACTGGATCGTCGACTACTGGTACGGGA AGCGGCCGGCGGTCCAACCCGCTCCGGCGGCCTGA
Upstream 100 bases:
>100_bases CAGCACGAACAACCAGTGGGATGCAGGTGGCACGCGGCATCCTGCACAGGAATCTACCGCGCGCAGGCATCGCGCCCGCA CGCTTTCGGACAGACCGACC
Downstream 100 bases:
>100_bases CGGAGAACAACCATGCTGGCATACATACTCAGGCGCCTGCTGTTGATGATCCCGACGCTGATCGGCGTCGTGACGATCAC ATTCGCCGTCACGCAGTTCG
Product: extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 624; Mature: 624
Protein sequence:
>624_residues MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPDAPNDGTLNFENYDEAQSYDS LNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADDVEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTS PQASPLYNAQFSIIKRAVVVDSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSSTQWARKYVGKNFSNGMLKKGE FPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSRMMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTL PPEVFGPMVKQPSTLPPGSLRANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKAVDALIRAALAANTLDDLETA THALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPASYQYEDWIVDYWYGKRPAVQPAPAA
Sequences:
>Translated_624_residues MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPDAPNDGTLNFENYDEAQSYDS LNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADDVEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTS PQASPLYNAQFSIIKRAVVVDSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSSTQWARKYVGKNFSNGMLKKGE FPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSRMMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTL PPEVFGPMVKQPSTLPPGSLRANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKAVDALIRAALAANTLDDLETA THALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPASYQYEDWIVDYWYGKRPAVQPAPAA >Mature_624_residues MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPDAPNDGTLNFENYDEAQSYDS LNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADDVEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTS PQASPLYNAQFSIIKRAVVVDSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSSTQWARKYVGKNFSNGMLKKGE FPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSRMMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTL PPEVFGPMVKQPSTLPPGSLRANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKAVDALIRAALAANTLDDLETA THALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPASYQYEDWIVDYWYGKRPAVQPAPAA
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=588, Percent_Identity=34.1836734693878, Blast_Score=315, Evalue=8e-87,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69822; Mature: 69822
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPD CCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC APNDGTLNFENYDEAQSYDSLNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADD CCCCCEECCCCCHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC VEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTSPQASPLYNAQFSIIKRAVVV HHHHHCCCEEEEEECCHHCCCCCCEEEEEECEEEHHCCCCCCCCCCCCHHHHHHHHHHEE DSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHC RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSST CCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHH QWARKYVGKNFSNGMLKKGEFPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSR HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHH MMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTLPPEVFGPMVKQPSTLPPGSL HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCHHH RANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA HHHHHHHHHHHHHCCCEECCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKA HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH VDALIRAALAANTLDDLETATHALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPAS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCC YQYEDWIVDYWYGKRPAVQPAPAA CCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MKLLKWRWAGVPRAALFACAVLLVSGSAMPRAALAVSAIAQYDQPKYLANFTHFDYADPD CCCEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHCCCCCCCCCCC APNDGTLNFENYDEAQSYDSLNPFLTRGSPAPDIKNLMFDTLMQRSWDELASEYALIADD CCCCCEECCCCCHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECC VEVAADGLSATFHINPAARFSNGDAITAADVKYSFDTLTSPQASPLYNAQFSIIKRAVVV HHHHHCCCEEEEEECCHHCCCCCCEEEEEECEEEHHCCCCCCCCCCCCHHHHHHHHHHEE DSHTIRFEFKHAERDAALIAGDLPVFSPKWGQRADGTRPPFDQIANEPPIASGAYLIEQR CCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHC RNDKQIAYVRNPHYWAANLPSRRGMFRFARVSFKLYLDQYTALEAFKAGDVDARMEYSST CCCCEEEEEECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHH QWARKYVGKNFSNGMLKKGEFPDGPAQMQGFLMNLRKPMFQDVRVRHALALAFDFDWMSR HHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHH MMFYGQYRRTNSFWDASPFAASGMPSAKELALLEPYRSTLPPEVFGPMVKQPSTLPPGSL HHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCHHHHHHHHCCCCCCCCHHH RANLRQARDLLAQAGWHYRDGALRDANGTPMTIEIIDDQPGMDRLILPYTQALATLGIHA HHHHHHHHHHHHHCCCEECCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHH YLHEIDSALYQKRLDNFEYDMTTYIYSPVTIPGAELTRRFGSAAASQPGSENYPGVKSKA HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHH VDALIRAALAANTLDDLETATHALDRVLINLYVLVPQYYMPNARIAYKTTLGHPAVVPAS HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCC YQYEDWIVDYWYGKRPAVQPAPAA CCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA