Click here to switch to the map view.

The map label for this gene is yejB [H]

Identifier: 116689731

GI number: 116689731

Start: 1900932

End: 1901984

Strand: Reverse

Name: yejB [H]

Synonym: Bcen2424_1709

Alternate gene names: 116689731

Gene position: 1901984-1900932 (Counterclockwise)

Preceding gene: 116689732

Following gene: 116689730

Centisome position: 54.59

GC content: 64.39

Gene sequence:

>1053_bases
ATGCTGGCATACATACTCAGGCGCCTGCTGTTGATGATCCCGACGCTGATCGGCGTCGTGACGATCACATTCGCCGTCAC
GCAGTTCGTGCCGGGCGGCCCGGTCGAGCAGGTGCTCGCGCAATTGCGCCACGGCAGCGCGCGCGGCGGGGAGGCGGGCG
GAGGCGCGGGCGGCTACCACGGCAGCCAGGGTGTCGACCCGCAGCAGATCGAGCAGATCCGCAAGCAGTTCGGCTTCGAC
AAGCCGCCGCTCGAACGCTACGTGCTGATGCTGAAAAGCTATGCGACGTTCGACCTCGGCCAGTCCTACTTCGCGCACCG
CAGCGTGTGGGCGGTAATCCGCTCGAAGCTGCCGGTGTCGATCACGCTCGGGCTTTGGACGGTGATCCTCACGTATCTCG
TGTCGGTGCCGCTCGGCATCGCGAAGGCTGTGCGCAACGGTTCGCGGTTCGACACCGTGACGAGCGTGCTGGTGCTGACC
GGCTATGCCGTGCCGGGCTTCGTGCTCGGCGTGCTGCTGCTGATGCTGTTCGGCGGCGGCACGTTCTGGCAGGTGTTTCC
GATGCGCGGGCTCACGTCGGACAATTTCGACGATCTGACGCTGATCGGCAAGACGCTCGACTATCTGTGGCACATGGTGA
TGCCGGTCACCGCGTCGGTGATCGGCAATTTCGCGATCGTCACGATCCTGACGAAGAACACGTTCCTCGACGAAATCGGC
CGGCAATACGTGCTGACCGCGCGCGCGAAAGGGGCGCCGGAGCGCGACGTGCTGTGGAAGCACGTGCTGCGCAATGCGGC
GATCCCGCTGCTCACCGGGTTGCCGGCCGCGTTCGTCGGTGCATTCCTGAACGGCAACCTGTTGATCGAGACGCTGTTCT
CGCTCGACGGGATGGGGCAACTGTCGTACGACTCGGTGATCCGCCGCGACTATCCGGTCGTGCTCGGCTCGCTGTTCCTG
TTCACCCTGATCGGTCTGCTGACCAAGCTTATCGCGGATATCTGCTATGTCCTCGTCGACCCCCGTATCCAGTTCAGCCG
CCTGGACCACTGA

Upstream 100 bases:

>100_bases
CGTGCCGGCTTCCTATCAGTACGAGGACTGGATCGTCGACTACTGGTACGGGAAGCGGCCGGCGGTCCAACCCGCTCCGG
CGGCCTGACGGAGAACAACC

Downstream 100 bases:

>100_bases
TCCAGCGTGCGCGCCGTCGCCGTCGCCGTGGCGGCGCACGTGGCAGCGCTTTCGTGCGCAGCCGCTCGGCTATGCAAGCC
TCGCGATCTTCGCGACGCTG

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MLAYILRRLLLMIPTLIGVVTITFAVTQFVPGGPVEQVLAQLRHGSARGGEAGGGAGGYHGSQGVDPQQIEQIRKQFGFD
KPPLERYVLMLKSYATFDLGQSYFAHRSVWAVIRSKLPVSITLGLWTVILTYLVSVPLGIAKAVRNGSRFDTVTSVLVLT
GYAVPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFDDLTLIGKTLDYLWHMVMPVTASVIGNFAIVTILTKNTFLDEIG
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL
FTLIGLLTKLIADICYVLVDPRIQFSRLDH

Sequences:

>Translated_350_residues
MLAYILRRLLLMIPTLIGVVTITFAVTQFVPGGPVEQVLAQLRHGSARGGEAGGGAGGYHGSQGVDPQQIEQIRKQFGFD
KPPLERYVLMLKSYATFDLGQSYFAHRSVWAVIRSKLPVSITLGLWTVILTYLVSVPLGIAKAVRNGSRFDTVTSVLVLT
GYAVPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFDDLTLIGKTLDYLWHMVMPVTASVIGNFAIVTILTKNTFLDEIG
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL
FTLIGLLTKLIADICYVLVDPRIQFSRLDH
>Mature_350_residues
MLAYILRRLLLMIPTLIGVVTITFAVTQFVPGGPVEQVLAQLRHGSARGGEAGGGAGGYHGSQGVDPQQIEQIRKQFGFD
KPPLERYVLMLKSYATFDLGQSYFAHRSVWAVIRSKLPVSITLGLWTVILTYLVSVPLGIAKAVRNGSRFDTVTSVLVLT
GYAVPGFVLGVLLLMLFGGGTFWQVFPMRGLTSDNFDDLTLIGKTLDYLWHMVMPVTASVIGNFAIVTILTKNTFLDEIG
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQLSYDSVIRRDYPVVLGSLFL
FTLIGLLTKLIADICYVLVDPRIQFSRLDH

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4174

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788504, Length=362, Percent_Identity=51.1049723756906, Blast_Score=384, Evalue=1e-108,
Organism=Escherichia coli, GI1789965, Length=365, Percent_Identity=33.972602739726, Blast_Score=184, Evalue=7e-48,
Organism=Escherichia coli, GI1787497, Length=346, Percent_Identity=28.9017341040462, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI1787053, Length=346, Percent_Identity=30.3468208092486, Blast_Score=145, Evalue=5e-36,
Organism=Escherichia coli, GI1789888, Length=345, Percent_Identity=26.0869565217391, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1787761, Length=351, Percent_Identity=28.2051282051282, Blast_Score=106, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 38392; Mature: 38392

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAYILRRLLLMIPTLIGVVTITFAVTQFVPGGPVEQVLAQLRHGSARGGEAGGGAGGYH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GSQGVDPQQIEQIRKQFGFDKPPLERYVLMLKSYATFDLGQSYFAHRSVWAVIRSKLPVS
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ITLGLWTVILTYLVSVPLGIAKAVRNGSRFDTVTSVLVLTGYAVPGFVLGVLLLMLFGGG
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
TFWQVFPMRGLTSDNFDDLTLIGKTLDYLWHMVMPVTASVIGNFAIVTILTKNTFLDEIG
CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHC
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQ
HHEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCC
LSYDSVIRRDYPVVLGSLFLFTLIGLLTKLIADICYVLVDPRIQFSRLDH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC
>Mature Secondary Structure
MLAYILRRLLLMIPTLIGVVTITFAVTQFVPGGPVEQVLAQLRHGSARGGEAGGGAGGYH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
GSQGVDPQQIEQIRKQFGFDKPPLERYVLMLKSYATFDLGQSYFAHRSVWAVIRSKLPVS
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ITLGLWTVILTYLVSVPLGIAKAVRNGSRFDTVTSVLVLTGYAVPGFVLGVLLLMLFGGG
EHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
TFWQVFPMRGLTSDNFDDLTLIGKTLDYLWHMVMPVTASVIGNFAIVTILTKNTFLDEIG
CCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEEHHHHHHHHHC
RQYVLTARAKGAPERDVLWKHVLRNAAIPLLTGLPAAFVGAFLNGNLLIETLFSLDGMGQ
HHEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHCCHHHHHHHHHCCCCCC
LSYDSVIRRDYPVVLGSLFLFTLIGLLTKLIADICYVLVDPRIQFSRLDH
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]