Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689711
Identifier: 116689711
GI number: 116689711
Start: 1877717
End: 1877929
Strand: Direct
Name: 116689711
Synonym: Bcen2424_1689
Alternate gene names: NA
Gene position: 1877717-1877929 (Clockwise)
Preceding gene: 116689710
Following gene: 116689713
Centisome position: 53.9
GC content: 57.75
Gene sequence:
>213_bases ATGCCTGAACGTTTCCAAACCCTTGAAAAATTTGTGTTTTCCCTCGTCGTGATGTCCGCCGTCGTGTGCTCGGCCTTCCT CGCGTACGAGCGTCACCCCGAGATCAAGATCGCGCTGCACGAAGGCGAAGCGCTGATGCGCGAGAGCGCCAAGTACTCGG TCATCTGCTCGCCGTCCAAGGTCGATCCTTGCGTCGAGATGTCCGCATACTGA
Upstream 100 bases:
>100_bases TGTCTTATCTCGTTTGACCCCATCCTCGGTATGCGGGCAGGGTTATAGGGAAAACCCTTATCTCAAGGTATAATTACGGC GAGAGAGAAAGGTCCCAACC
Downstream 100 bases:
>100_bases GCGGCCTGACTGAGCGGCTTTTCCGCCTTTCGGACTTGCCCTACATCACTGCCGGCCTGAATGCCTTAAAGTCGCGTCCA CCAGGTATTCAGAAACCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MPERFQTLEKFVFSLVVMSAVVCSAFLAYERHPEIKIALHEGEALMRESAKYSVICSPSKVDPCVEMSAY
Sequences:
>Translated_70_residues MPERFQTLEKFVFSLVVMSAVVCSAFLAYERHPEIKIALHEGEALMRESAKYSVICSPSKVDPCVEMSAY >Mature_69_residues PERFQTLEKFVFSLVVMSAVVCSAFLAYERHPEIKIALHEGEALMRESAKYSVICSPSKVDPCVEMSAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7901; Mature: 7770
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 8.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERFQTLEKFVFSLVVMSAVVCSAFLAYERHPEIKIALHEGEALMRESAKYSVICSPSK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCEEEEECCCC VDPCVEMSAY CCCCCCCCCC >Mature Secondary Structure PERFQTLEKFVFSLVVMSAVVCSAFLAYERHPEIKIALHEGEALMRESAKYSVICSPSK CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHCCCCEEEEECCCC VDPCVEMSAY CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA