Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is 116689669

Identifier: 116689669

GI number: 116689669

Start: 1829686

End: 1830591

Strand: Reverse

Name: 116689669

Synonym: Bcen2424_1647

Alternate gene names: NA

Gene position: 1830591-1829686 (Counterclockwise)

Preceding gene: 116689670

Following gene: 116689661

Centisome position: 52.54

GC content: 69.43

Gene sequence:

>906_bases
ATGACCGATACCTCGCCCACCCGCCCGCTTGAAATCGACGCGCGCCGGCCGCTCGAGCCGGCGGCAGTCGCGCTGCTGCG
GGCGGTCGGCTCGGCCTGCGCCCGGCTCGACGCGGCATTCGTCGTGGCCGGCGCGACCGCGCGCGACATCCTGATGTGGC
ATGTCCACGGCATCCGTCCGGTGCGTGCGACGCGGGACGTCGACGTCGCTGTGTGCGCGGTCAACTGGCCGTTTCACGAG
CGGCTCGTCGATGCGCTCGTCGCGACCGGGCAATTCGCCCGCGCGCCGAAGCATCGGCAGAAACTGCTGTTCGACAGCGG
CTCGCCGGGGTTTCGCACCGAACTCGATCTGGTGCCGTTCGGGCCGCTCGAAACACCGCCCGGCGAAATCGCATGGCCGC
CGGGCGGCGACTTCGTGCTGAACGTGCTGGGGTTTCAGGAGGCGGTCGATACGGCGCTCGCCGTGTCGATCGGCGCCGGC
ATCACGGTGCCGGTGGCGAGCCTGCCGGCGCTCGCGCTGCTGAAGCTGCTCGCGTGGAAGGACCGGCGCGCGCGCCAGAA
CAGCGACGCATACGACCTGCTGTTCCTGCTCACGCATTTTCACGATGCGGGCAATCGCGAGCGCATCTGGGACGTTGCGC
CCGACCTGATCGAACAACATGGCTTCCAGCCGGAGCTGGCGGCAGCGGCGCTGCTCGCACGCGACGCGAAGCAGATTGCG
TCACCGCACACGCACGATGCGATCCGCGCACTGCTATCCGACGACGCGACTTACGCGATGCTCGGGCAGGATCTGCAGGC
CCGCGCGTTCGCGCTGTTGCCCGGGGAATTCAACGACGACGCGGAACGGTATCTCGATGCGTTCCGCGGCGGCTTCCTCG
CGGGTCCGCTCGTCCATCGGGCGTGA

Upstream 100 bases:

>100_bases
TGGCGCGAGCAGGATGTTCCGCTCGTGCCGCCGCTGTTGGTCTACGCGGATCTCGTCTCGTCCGGAGACAGCCGCAATCT
TGCCGCCGCCGAACACATCC

Downstream 100 bases:

>100_bases
CATCAGCCAGTCACGCCGTTTTCACCGTCCTGCCCGGGTCGGCTCGACGAGGAAGCTGGAATCGGCGAGCGGCTCGTTTG
CAAAGGACAACCACGTCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTDTSPTRPLEIDARRPLEPAAVALLRAVGSACARLDAAFVVAGATARDILMWHVHGIRPVRATRDVDVAVCAVNWPFHE
RLVDALVATGQFARAPKHRQKLLFDSGSPGFRTELDLVPFGPLETPPGEIAWPPGGDFVLNVLGFQEAVDTALAVSIGAG
ITVPVASLPALALLKLLAWKDRRARQNSDAYDLLFLLTHFHDAGNRERIWDVAPDLIEQHGFQPELAAAALLARDAKQIA
SPHTHDAIRALLSDDATYAMLGQDLQARAFALLPGEFNDDAERYLDAFRGGFLAGPLVHRA

Sequences:

>Translated_301_residues
MTDTSPTRPLEIDARRPLEPAAVALLRAVGSACARLDAAFVVAGATARDILMWHVHGIRPVRATRDVDVAVCAVNWPFHE
RLVDALVATGQFARAPKHRQKLLFDSGSPGFRTELDLVPFGPLETPPGEIAWPPGGDFVLNVLGFQEAVDTALAVSIGAG
ITVPVASLPALALLKLLAWKDRRARQNSDAYDLLFLLTHFHDAGNRERIWDVAPDLIEQHGFQPELAAAALLARDAKQIA
SPHTHDAIRALLSDDATYAMLGQDLQARAFALLPGEFNDDAERYLDAFRGGFLAGPLVHRA
>Mature_300_residues
TDTSPTRPLEIDARRPLEPAAVALLRAVGSACARLDAAFVVAGATARDILMWHVHGIRPVRATRDVDVAVCAVNWPFHER
LVDALVATGQFARAPKHRQKLLFDSGSPGFRTELDLVPFGPLETPPGEIAWPPGGDFVLNVLGFQEAVDTALAVSIGAGI
TVPVASLPALALLKLLAWKDRRARQNSDAYDLLFLLTHFHDAGNRERIWDVAPDLIEQHGFQPELAAAALLARDAKQIAS
PHTHDAIRALLSDDATYAMLGQDLQARAFALLPGEFNDDAERYLDAFRGGFLAGPLVHRA

Specific function: Unknown

COG id: COG4849

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32617; Mature: 32485

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTSPTRPLEIDARRPLEPAAVALLRAVGSACARLDAAFVVAGATARDILMWHVHGIRP
CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCC
VRATRDVDVAVCAVNWPFHERLVDALVATGQFARAPKHRQKLLFDSGSPGFRTELDLVPF
CCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHCCCHHHHHHEECCCCCCCCEEECEECC
GPLETPPGEIAWPPGGDFVLNVLGFQEAVDTALAVSIGAGITVPVASLPALALLKLLAWK
CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHH
DRRARQNSDAYDLLFLLTHFHDAGNRERIWDVAPDLIEQHGFQPELAAAALLARDAKQIA
HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
SPHTHDAIRALLSDDATYAMLGQDLQARAFALLPGEFNDDAERYLDAFRGGFLAGPLVHR
CCCHHHHHHHHHCCCCHHHHHCCCHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHC
A
C
>Mature Secondary Structure 
TDTSPTRPLEIDARRPLEPAAVALLRAVGSACARLDAAFVVAGATARDILMWHVHGIRP
CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHCCCCC
VRATRDVDVAVCAVNWPFHERLVDALVATGQFARAPKHRQKLLFDSGSPGFRTELDLVPF
CCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHCCCHHHHHHEECCCCCCCCEEECEECC
GPLETPPGEIAWPPGGDFVLNVLGFQEAVDTALAVSIGAGITVPVASLPALALLKLLAWK
CCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHH
DRRARQNSDAYDLLFLLTHFHDAGNRERIWDVAPDLIEQHGFQPELAAAALLARDAKQIA
HHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
SPHTHDAIRALLSDDATYAMLGQDLQARAFALLPGEFNDDAERYLDAFRGGFLAGPLVHR
CCCHHHHHHHHHCCCCHHHHHCCCHHHHEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA